Gene detail information of Glyur000389s00028190 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003529129.1 | 8.17E-41 | PREDICTED: uncharacterized protein LOC100305688 [Glycine max] |
| trEMBL | tr|C6SW80|C6SW80_SOYBN | 3.00E-41 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G16750.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00389 | 138184 | 139155 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 42.650 |
| SRR1783600 | control | 42.640 |
| SRR1783602 | moderate drought stress | 54.079 |
| SRR1811619 | moderate drought stress | 54.139 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 138.204 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 136.460 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 453.035 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 440.540 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 286.283 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 285.811 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 100.092 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 99.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 67.380 |
| SRR2868004 | Drought Stress (root) | 164.380 |
| SRR2967015 | Control (root) | 241.611 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 159.441 |
| SRR9715740 | Leaf | 125.084 |
| SRR9715741 | Leaf | 189.418 |
| SRR9715739 | Root | 84.556 |
| SRR9715742 | Root | 102.553 |
| SRR9715743 | Root | 92.977 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 110.881 |
| SRR8749028 | MeJA induced 9h | 148.747 |
| SRR8749029 | MeJA induced 9h | 180.127 |
| SRR8749030 | Uninduced | 68.889 |
| SRR8749031 | Uninduced | 48.396 |
| SRR8749032 | Uninduced | 127.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 137.845 |
| SRR8400027 | Control - Root | 125.645 |