Gene detail information of Glyur000388s00027956 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G34670.2 | 8.00E-70 | Protein of unknown function (DUF630 and DUF632) |
| NR | XP_004488272.1 | 0 | PREDICTED: uncharacterized protein LOC101505921 isoform X1 [Cicer arietinum] |
| trEMBL | tr|G7IGH9|G7IGH9_MEDTR | 0 | DUF630 family protein {ECO:0000313|EMBL:AES65744.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00388 | 1005 | 6737 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000388s00027956.1 | PF04783.7 | DUF630 | 1 | 59 | 7.30E-18 |
| Glyur000388s00027956.1 | PF04782.7 | DUF632 | 207 | 496 | 5.70E-66 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.208 |
| SRR1783600 | control | 2.081 |
| SRR1783602 | moderate drought stress | 2.207 |
| SRR1811619 | moderate drought stress | 2.014 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.110 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.803 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.505 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.617 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.849 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.987 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.281 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.148 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.467 |
| SRR2868004 | Drought Stress (root) | 20.661 |
| SRR2967015 | Control (root) | 28.523 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.415 |
| SRR9715740 | Leaf | 1.399 |
| SRR9715741 | Leaf | 1.953 |
| SRR9715739 | Root | 0.141 |
| SRR9715742 | Root | 5.265 |
| SRR9715743 | Root | 5.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.109 |
| SRR8749028 | MeJA induced 9h | 8.823 |
| SRR8749029 | MeJA induced 9h | 6.552 |
| SRR8749030 | Uninduced | 3.866 |
| SRR8749031 | Uninduced | 8.968 |
| SRR8749032 | Uninduced | 4.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.099 |
| SRR8400027 | Control - Root | 5.996 |