Gene detail

Gene detail information of Glyur000387s00017715

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G58640.2	1.00E-69	Mitogen activated protein kinase kinase kinase-related
NR	XP_004505488.1	2.10E-94	PREDICTED: serine/threonine-protein kinase EDR1-like isoform X2 [Cicer arietinum]
COG	YP_828710.1	5.00E-20	serine/threonine protein kinase [Candidatus Solibacter usitatus Ellin6076]
Swissprot	tr\|Q9FPR3\|EDR1_ARATH	1.00E-42	Serine/threonine-protein kinase EDR1
trEMBL	tr\|K7LUH0\|K7LUH0_SOYBN	8.00E-94	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA12G15370.2}

Sequence

Transcript Sequence

>Glyur000387s00017715.1
CAAAATTTACCACTTTTATTTTGGTACTGTAGCTTTATTAACCCTTGACTGGAAATGCTTCAGTTTNATGTGGTATGCAATGATTTGTACTGTACCTTGTATTTGGTTCATGCAGGTTACGTGGTCTCCAGCTTGATGCAGTTGGAGCTGCCAAAGTATGCCTTTCAATGATTTGTGGTTTTAGAACTACCTTTGGCTTTGATACATCTCATATGGGTTAAGAAGGGTGGAGAAATGGTTTTAAATCCAAAATTCATAAGAACATGGAGGAGACACGAGAAGATGCACAGTCGGCAGAGCAAACGCCATCCAACGTGTCATAAGGCATCACAAATTCTCTGGCACACTGGAATGCTTTCAGAACCAATACCAAATGGTTTTTATTCAGTTGTTCCGGAGAAAAGGCTCAAGAAACTTTTTGATAGTATTCCTACTTTGGACGAGCTTCATGCTTTGGGTGGAGAGGGTTTTAGGGCTGATGTCATTGTTGTGGATGCAGAGAAAGATAGAAAGTTATCTATGTTGAAGCAATTAATCGTGGCATTGGTTAAAGGATTGAACACAAATCCAGCTGCAATGATTAAGAAGATAGCTGGACTAGTTTCTGATTTTTATAAGCGAGCAAATGTAGAAAGTCCAGCAAAAGCTGCACTTGAGGAATCCTCCCACATGTTTGAGAATCGTGGTATCCAGATGCTAGGGCATATAAAGCATGGTTCATGCCGTCCTCGAGCTATCTTATTTAAAGTATTAGCAGATGCTGTAGGTCTTGAAAGCAGGCTCATGATGGGTTTTCCAAATGATGGGGATGCTGAATGTGTAGACTCATACAAGCATATGTCCGTGATTGTTGTGTTAAATTCTGTGNAACTGCTTGTTGATCTTATGCGCTTTCCTGGCCAACTGTTACCACAATCAAGCAAGTCAATTCTTATGACACACATTTCTGCAGCGGGAGAGAGTGATTCAGCAGAAAATGATTCTTGTGATTCACCAATGGAACCAAGCAGTCCTTTATATGGGGTTTCNGAGAGTGTTGAAAAGGAGGAAAATCTCCAATTCCATAGAAGTTTTGAAGCATCTTCAAATGTATCAGGTCTTCGTATGCGAAACATGATGTTACGATCAAATACCAGTCTGGATGGGAAATTAAGTTTGTCTCATAGTGAACCCAACATTGCAACCTCATTTGGTCGGCGAAGTCGAAGAAAGGTCATTGCTGAACAGAGGACTGCTAGTTCAAGTCCAGAACATCCATCGTTTCGTGGGCGGTCCAAGCTTGGTGGTGACAGGACTGCATTTAGAGATTTTGCTGATAACCAGGCCACATCAAGATCCAGCTATAAGTCAGATGGTGCATCCTCATCAGAAGCTCGTAGGATACGGAGAAGAAGCATTAGTATTACACCAGAGATTGGTGATGATATTGCAAGGGCTGTACGGGCAATGAATGAAAAACTAAAGCAAAATCGTCTTCTAAGAGAACAAGGGGATGATAGTTCATTGTCTCATTCTCCCAATGAGAGAATTAGCAGTGCAGATCTTCAGAAAAATGTGTCAAATTTCCATCTCGATGGTCATCATGAAAGGTCCCCCTTATATTCGCTGCACCATGACAATGTAACTTCTCAGAAGGCAATGTCATTACCCTCTTCACCACATGATTTTCGAGGACAAGCTTCTGAGAGAAGCAGGCCATCCNGATATGAAATGAATGAACTGGAGTCGAGTTGGAATAAAGTCCTTGAATCACAAATGTTCAATAATAAACCTCTGTTACCATATGAAGAGTGGAATATTGACTTCTCAGAATTGACTGTCGGCACTCGTGTTGGGATCGGGTTCTTTGGAGAAGTTTTCCGTGGAATATGGAATGGCACAGATGTTGCAATCAAGGTTTTCCTAGAGCAAGATTTAACTGTTGAAAACATGGAAGATTTCTGCAATGAGATAACCATTCTCAGCCGACTCCGACATCCTAATGTCATCTTATTTCTTGGTGCATGCACAAAGCCTCCACGCTTGTCAATGGTGACCGAATATATGGAGATGGGATCTTTGTTTTACTTGATTCATGTGAGTGGTCAAAAGAAGAAGCTTAGCTGGCGGAGAAGATTAAGGATGCTGCGTGACATATGCAGGTAAGTATTCTGGTAATTCATACCTTCCAGAAAAATCTGTGTTGTTTGTTTTCCACAACTTTTTTATGAAAAAAATGATGATGCAGATGGTAGTAAATTATTTTTTGTTCATTCAGCCTTAATGGAATATGAGACGGATCCCTTATTCCCACCATAGTGAATATANGGCAAATAAAAAATGTTTTTATTTTTTTTAAGTTTTTCCCTGATGAAAGAGAAATGGAATTTACAATTCATCAGAAGTTTTGAATTTAATTAATTTATTACCACAATAAAATCAAGTTCCAGATGACTTTGCATTTAAGTCAAATATATCGAAGTGAAATTATTTGTTCTGTAAGACTATTATCAACTTGGTGGGTGATCGTATTTTGATAGTTGATATCGGTAAGATTGCATTTCATCCGTTGACATTGACGAAAACAGCTCGGTGTTTAGGGGCTTGATGCACATGCATCGTATGAAGATTATTCACCGTGACGTGAAAAGTGCAAATTGTCTTGTGGATAAGCATTGGACAGTGAAAATCTGTGATTTTGGACTTTCGAGAATAGTGACAGAATCTCCCATGAGAGATTCTTCTTCAGCTGGAACCCCTGAATGGATGGCTCCTGAACTGATTCGAAATGAACCATTCACTGAAAAATGTGATATCTTTAGCCTAGGGGTGATAATGTGGGAGCTCTGCACCTTGAATAGACCATGGGAAGGCATACCTCCAGAGAGGGTGGTTTATGCCGTTGCTCATGAGGGTTCCAGATTGGAGATTCCTGAAGGCCCGATAGGCAGGCTGATTTCAGAGTGTTGGGCAGAACCGCATGAGCGGCCAAGTTGTGAGGAGATCCTCTCTCGCTTGGTGGACATCGAGTACTCCATGTGCTGATGCAGTGTTTATCTTTTGTACATAATGAACTCAGGGTAGAGTTATTACATTGTGTTCTCGGCTTATGTTGTAAACTAATATGAATTTTGTTCTTTTCCTCAAAACATGTTTAAACGTGCATGGGTGTGAATTCTTCGACTTACACCCTTGCTGCAAACTCGTCTCTTTTACGGGGCAN

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00387	141795	152429	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:2.1.3

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000387s00017715.1	PF07714.12	Pkinase_Tyr	2	137	3.90E-34

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	9.484
SRR1783600	control	9.253
SRR1783602	moderate drought stress	10.068
SRR1811619	moderate drought stress	10.380

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	15.976
DRR006520	Root Summer glycyrrhizin high producing strain	15.969
DRR006521	Root Winter glycyrrhizin high producing strain	18.676
DRR006522	Root Winter glycyrrhizin high producing strain	18.270
DRR006523	Root Summer glycyrrhizin low producing strain	12.906
DRR006524	Root Summer glycyrrhizin low producing strain	12.955
DRR006525	Leaf Summer glycyrrhizin high producing strain	9.585
DRR006526	Leaf Summer glycyrrhizin high producing strain	9.640

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	36.692
SRR2868004	Drought Stress (root)	36.120
SRR2967015	Control (root)	38.253

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	14.336
SRR9715740	Leaf	14.150
SRR9715741	Leaf	18.438
SRR9715739	Root	4.878
SRR9715742	Root	19.153
SRR9715743	Root	18.969

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	18.932
SRR8749028	MeJA induced 9h	17.806
SRR8749029	MeJA induced 9h	13.811
SRR8749030	Uninduced	9.769
SRR8749031	Uninduced	8.714
SRR8749032	Uninduced	7.020

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	28.241
SRR8400027	Control - Root	30.338