Gene detail information of Glyur000387s00017713 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G30990.2 | 5.00E-49 | Protein of unknown function (DUF688) |
| NR | XP_004505483.1 | 0 | PREDICTED: uncharacterized protein LOC101506881 isoform X1 [Cicer arietinum] |
| trEMBL | tr|I1LSG8|I1LSG8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G15390.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00387 | 128270 | 132401 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000387s00017713.1 | PF05097.7 | DUF688 | 7 | 355 | 1.20E-83 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.325 |
| SRR1783600 | control | 1.299 |
| SRR1783602 | moderate drought stress | 1.568 |
| SRR1811619 | moderate drought stress | 1.499 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.805 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.794 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.384 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.266 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.043 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.324 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.537 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.510 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.928 |
| SRR2868004 | Drought Stress (root) | 12.718 |
| SRR2967015 | Control (root) | 13.341 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.298 |
| SRR9715740 | Leaf | 1.419 |
| SRR9715741 | Leaf | 2.215 |
| SRR9715739 | Root | 0.138 |
| SRR9715742 | Root | 2.429 |
| SRR9715743 | Root | 2.127 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.090 |
| SRR8749028 | MeJA induced 9h | 7.648 |
| SRR8749029 | MeJA induced 9h | 8.636 |
| SRR8749030 | Uninduced | 6.827 |
| SRR8749031 | Uninduced | 4.052 |
| SRR8749032 | Uninduced | 5.483 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.322 |
| SRR8400027 | Control - Root | 4.736 |