Gene detail

Gene detail information of Glyur000387s00017711.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G42670.1	3.00E-103	Protein of unknown function (DUF1637)
NR	NP_001241542.1	4.21E-164	uncharacterized protein LOC100805101 [Glycine max]
trEMBL	tr\|C6TMW7\|C6TMW7_SOYBN	2.00E-164	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA06G42920.3}

Sequence

Transcript Sequence

>Glyur000387s00017711.1
CTTCTCTTCTTCCTCTTTCTTCTGTTCCTTATACTTATACTTATAGCAATCCCTCGCTCCCTCTCTCTATGCACACTCATCCATTCACCTTCAATTCCTTCAACTTAAACCCCCTTTCTCTTCTTCTTCTTCTCATTCATCCACGAAATCGCCATCCAGAATCTCCTTCGCCTTCAATGATGGGTCTCTCAGATTAGTTGNGAAGGAACAGATTACGACATGCAGATTCATTACCGTTGGTTTGATTCCGAGGCTAAAATACGGTTGTTAGCCAGTTGTATCTCCAATCCCTATTGCAGTCTATAAGCTACTCTCGAGGTGTTATCAGCTTGCTGACCTTAGGGATTTGGTCTGAGTAGATAAGTTGGTCACAAGTTTACACCATGCCATATTATGTACAGAGGCTTTATAGGCTGTGCAAGGCATCCTTTTCACCTGATGGACCTGTGTCAGAAGAAGCCATTCAAAAAGTTCGTGAGAAGTTAGAAAGAATCAAGCCGTCAGATGTAGGCCTTGAACAGGAGGCACAAGTGGTTCGAAATTGGTCTGGTTCAATGCTTGAGCGAAATGGGGGNCATCAGTCTTTGCCACCTATCAAATACTTGCATTTGCATGAATGTGACTCCTTCTCNGTAAGCGAAATAGGGATTTTTTGCATGCCCCCGTCATCTATCATTCCTCTCCATAATCATCCTGGAATGACAGTGTTGAGCAAGCTCTTATATGGTTCAATGTATGTTAAATCCTATGACTGGATTGATGTACCTGGCTCCACTGATCCATCTGAAGCTAGACCCGCAAAGCTTGTCAAAGATAGAGAGATGACAGCACCAAGTCCAACGACAGTTCTTTATCCCACCAGTGGAGGAAACATCCATTGTTTTCAAGCCATAACCCCTTGTGCAATCTTTGACATATTATCTCCACCTTACTCTTCGGAGCATGGAAGACACTGCACTTACTTCAGGAGATCCCAAAGGAAAGACCATCCAGTTAGTCTTCAGTTGGATGGAGTTACGGTTTCCGAAGTAACTTGGTTGGAAGAGTTTCAGCCTCCTGACGACTTTGTGATCCGGAGAGGACTGTACAGGGGTCCAGTGATTAGAACTTGAAAATTTTTATTGTTTTGCTGTATTTTACACCACAAAGAAATTGTTGCCCTTTCTTATCTTTAGGTTACGGCAAAAAGGGAACATTGGGATGTGCAATAATTGTTATTATATAATTATATTCTTTGGCTATGTCAGTCAGTTAGCCATATTTGGGTTTGTACATAATAATGCACTAATGTAATCAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00387	115591	121977	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K10712	ADO	EC:1.13.11.19	Taurine and hypotaurine metabolism	map00430

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function
GO:0047800 cysteamine dioxygenase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000387s00017711.1	PF07847.7	DUF1637	34	239	3.60E-67

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	10.739
SRR1783600	control	10.744
SRR1783602	moderate drought stress	10.347
SRR1811619	moderate drought stress	10.658

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	20.734
DRR006520	Root Summer glycyrrhizin high producing strain	19.528
DRR006521	Root Winter glycyrrhizin high producing strain	15.451
DRR006522	Root Winter glycyrrhizin high producing strain	15.696
DRR006523	Root Summer glycyrrhizin low producing strain	22.247
DRR006524	Root Summer glycyrrhizin low producing strain	21.744
DRR006525	Leaf Summer glycyrrhizin high producing strain	10.618
DRR006526	Leaf Summer glycyrrhizin high producing strain	10.194

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	18.229
SRR2868004	Drought Stress (root)	15.181
SRR2967015	Control (root)	16.114

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	9.692
SRR9715740	Leaf	12.712
SRR9715741	Leaf	11.014
SRR9715739	Root	6.923
SRR9715742	Root	6.287
SRR9715743	Root	5.833

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	24.916
SRR8749028	MeJA induced 9h	17.252
SRR8749029	MeJA induced 9h	21.004
SRR8749030	Uninduced	8.296
SRR8749031	Uninduced	5.863
SRR8749032	Uninduced	7.785

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	21.430
SRR8400027	Control - Root	19.660