Gene detail

Gene detail information of Glyur000387s00017699.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G30980.1	0	SHAGGY-related protein kinase dZeta
NR	KHN33940.1	0	Shaggy-related protein kinase zeta [Glycine soja]
COG	YP_008149401.1	1.00E-23	hypothetical protein SCE1572_14835 [Sorangium cellulosum So0157-2]
Swissprot	tr\|Q39010\|KSG6_ARATH	0	Shaggy-related protein kinase zeta
trEMBL	tr\|I1LSH6\|I1LSH6_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA12G15470.1}

Sequence

Transcript Sequence

>Glyur000387s00017699.1
GAGAAAGGAGGAAGAAGAAGAAGTGTATTTCTCACATCACATGGCCTCCATGCCCTTGGGGCACCACCACCACCAACCGGCGGCGGCAGCTCCTCAACCGCCACAGTTTCAGGCGCAAGCCGAAGTTCCTCGCCGGAGCTCCGATATGGAAACAGATAAGGAAATGTCAGCTACTGTCCTTGAAGGGAATGATGCAGTCACTGGCCACATAATCTCCACCACAATTGGAGGCAAAAATGGTGAACCTAAACGAACCATCAGTTACATGGCAGAACGTGTTGTTGGCACTGGATCATTTGGAGTTGTTTTCCAGGCAAAGTGCTTGGAAACTGGGGAGGCAGTGGCTATAAAAAAGGTCTTGCAAGACGCACGATACAAAAATCGTGAACTGCAGTTAATGCGCTTGATGAATCACCCAAATGTAATTTCCCTGAAGCATTGTTTCTTCTCTACGACAAGCAGAGATGAACTTTTTCTGAACTTGGTAATGGAATATGTGCCTGAGACAATGTATCGAGTTCTAAAACACTACAATTCTATGAACCAGAGAATGCCTCTCATCTATGTGAAGTTATATACATATCAAATCTTTAGGGGATTAGCATATATCCATACTGCACTCAGAGTTTGCCATAGGGATGTGAAGCCTCAAAATCTTTTGGTTCATCCTCTTACTCACCAAGTTAAGCTTTGTGATTTTGGGAGTGCTAAAGTTCTGGTCAAGGGTGAATCAAACATTTCGTACATCTGTTCACGTTACTATCGGGCTCCAGAACTAATATTTGGTGCAACAGAATACACAACTTCTCTTGATATCTGGTCAGCTGGCTGTGTCCTTGCTGAACTTCTTCTAGGCCAGCCATTATTTCCAGGAGAAAATCAGGTGGACCAACTTGTGGAGATTATTAAGGTTCTTGGTACTCCAACTCGAGAAGAAATTCGTTGTATGAACCCAAATTATACAGATTTTAGATTCCCTCAGATTAAAGCTCATCCTTGGCACAAGGTTTTCCACAAGCGAATGCCTCCTGAAGCGATTGACCTTGCATCAAGGCTTCTCCAATATTCACCTAGTCTTCGCTGCACTGCGCTGGAAGCATGTGCACATCCTTTCTTTGATGAGCTTCGTGAGCCAAATGCCCGACTACCAAATGNCCGCCCGTTGCCCCCGCTATTCAACTTTAAACAGGAATTAGCTGGAGCATCACCTGAACTGATCAATAGGCTCATCCCAGAGCACATTAGGCGGCAGACTGGTGTCAGCTTCCCTCTTNCAGCTGGTACATAGTTGTAAAGAGATGAAACAATGAGTCAACCGATCTAGTGATCGATGTGAAGCAATGAACGGGCTATTTCTGGNTCAATATAACTGGGGCCCCTGTGAAGATGTATACATATGCGGCTGCTCGNGGCTCGGCATAAGATGGAAATTGGTGATTATCTAATATTTCATTCTAGTTAATGCATACTTATCCCTGCATCTGTACATTGTTTTGGTCAGATTTCAGAAAGCTAGGAGTATAAAATGATAGCAATCATGTCTACATAGGTAGAGGAGTCCCCCAAAATTGAGGGGCCTGGTAGTAGTTTGGCTTGTTTATCACGTCACCATATTCATGCTGTTGTTTCTATGTGCTTATGACAATCTCTTGAATCTTGATTCAATACCAGATTTTTCCTCGTTGTTTAGTACTCTTGTTACCCCCTTCCNCCCATTTTGCATAGTTTTTATTTGGAACATGCGGCCGGATTTGAATTTGCCAACATGTGCTTAAGGCTGTTCTCTGAATTCTGAAGAGTCATGAGAGTGTGGACAAGAGGGAAGGAATGAATTATTTCTTTTTGTTGATGATAGGGTCTTCACTCTGCACTGAGAGTGTTGTGCTTACTGTTATTGGCAGGGTATGTTGAGGTGAGGGAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00387	67956	73031	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.5.4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K14502	BIN2	EC:2.7.11.1	Plant hormone signal transduction	map04075

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000387s00017699.1	PF00069.20	Pkinase	78	359	1.10E-61

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	29.003
SRR1783600	control	29.326
SRR1783602	moderate drought stress	29.740
SRR1811619	moderate drought stress	29.110

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	34.261
DRR006520	Root Summer glycyrrhizin high producing strain	33.720
DRR006521	Root Winter glycyrrhizin high producing strain	33.886
DRR006522	Root Winter glycyrrhizin high producing strain	32.925
DRR006523	Root Summer glycyrrhizin low producing strain	52.361
DRR006524	Root Summer glycyrrhizin low producing strain	51.979
DRR006525	Leaf Summer glycyrrhizin high producing strain	20.922
DRR006526	Leaf Summer glycyrrhizin high producing strain	20.891

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	33.615
SRR2868004	Drought Stress (root)	30.155
SRR2967015	Control (root)	29.099

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	20.931
SRR9715740	Leaf	21.899
SRR9715741	Leaf	25.112
SRR9715739	Root	15.739
SRR9715742	Root	21.165
SRR9715743	Root	20.832

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	26.356
SRR8749028	MeJA induced 9h	25.140
SRR8749029	MeJA induced 9h	20.659
SRR8749030	Uninduced	14.305
SRR8749031	Uninduced	15.582
SRR8749032	Uninduced	15.033

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	42.734
SRR8400027	Control - Root	41.917