Gene detail information of Glyur000387s00017695


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G06400.12.00E-102Ras-related small GTP-binding family protein
NRAFK48917.11.32E-145unknown [Lotus japonicus]
COGYP_008431664.14.00E-25hypothetical protein N186_01315 [Thermofilum sp. 1910b]
Swissprottr|Q40195|RB11E_LOTJA3.00E-147Ras-related protein Rab11E
trEMBLtr|I3T8S5|I3T8S5_LOTJA5.00E-146Uncharacterized protein {ECO:0000313|EMBL:AFK48917.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold003874342945962-


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
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Gene Ontology

biological_process

GO:0006886  intracellular protein transport

GO:0006913  nucleocytoplasmic transport

GO:0007165  signal transduction

GO:0007264  small GTPase mediated signal transduction

GO:0015031  protein transport


cellular_component

GO:0005622  intracellular

GO:0016020  membrane


molecular_function

GO:0003924  GTPase activity

GO:0005525  GTP binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000387s00017695.1PF00071.17Ras151751.40E-59


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.995
SRR1783600control8.074
SRR1783602moderate drought stress8.506
SRR1811619moderate drought stress8.771

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain24.280
DRR006520Root Summer glycyrrhizin high producing strain23.577
DRR006521Root Winter glycyrrhizin high producing strain43.097
DRR006522Root Winter glycyrrhizin high producing strain41.493
DRR006523Root Summer glycyrrhizin low producing strain32.650
DRR006524Root Summer glycyrrhizin low producing strain32.371
DRR006525Leaf Summer glycyrrhizin high producing strain5.004
DRR006526Leaf Summer glycyrrhizin high producing strain4.964

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)40.647
SRR2868004Drought Stress (root)46.941
SRR2967015Control (root)58.670

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf22.867
SRR9715740Leaf15.752
SRR9715741Leaf25.458
SRR9715739Root23.438
SRR9715742Root21.881
SRR9715743Root23.378

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h43.993
SRR8749028MeJA induced 9h35.363
SRR8749029MeJA induced 9h53.750
SRR8749030Uninduced36.040
SRR8749031Uninduced43.371
SRR8749032Uninduced61.559

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root37.112
SRR8400027Control - Root34.944