Gene detail information of Glyur000387s00017692 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G42760.1 | 2.00E-22 | |
| NR | NP_001241436.1 | 2.43E-91 | uncharacterized protein LOC100811994 [Glycine max] |
| trEMBL | tr|C6T846|C6T846_SOYBN | 9.00E-92 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G15530.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00387 | 38064 | 38864 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000387s00017692.1 | PF07939.6 | DUF1685 | 146 | 180 | 6.30E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.657 |
| SRR1783600 | control | 1.690 |
| SRR1783602 | moderate drought stress | 3.313 |
| SRR1811619 | moderate drought stress | 3.412 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 33.691 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 32.867 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 35.315 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 34.470 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 18.688 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.690 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 30.599 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 29.851 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.847 |
| SRR2868004 | Drought Stress (root) | 97.182 |
| SRR2967015 | Control (root) | 110.512 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 30.095 |
| SRR9715740 | Leaf | 43.334 |
| SRR9715741 | Leaf | 41.169 |
| SRR9715739 | Root | 2.356 |
| SRR9715742 | Root | 3.706 |
| SRR9715743 | Root | 3.603 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.137 |
| SRR8749028 | MeJA induced 9h | 84.946 |
| SRR8749029 | MeJA induced 9h | 97.583 |
| SRR8749030 | Uninduced | 30.363 |
| SRR8749031 | Uninduced | 400.142 |
| SRR8749032 | Uninduced | 232.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.393 |
| SRR8400027 | Control - Root | 12.140 |