Gene detail information of Glyur000386s00015335 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G22882.1 | 1.00E-120 | Galactose-binding protein |
| NR | XP_003526394.1 | 0 | PREDICTED: uncharacterized protein slp1-like isoform X1 [Glycine max] |
| trEMBL | tr|K7KYQ1|K7KYQ1_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G48190.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00386 | 107843 | 112398 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000386s00015335.1 | PF07738.8 | Sad1_UNC | 215 | 337 | 1.70E-36 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.883 |
| SRR1783600 | control | 8.875 |
| SRR1783602 | moderate drought stress | 4.070 |
| SRR1811619 | moderate drought stress | 3.989 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.672 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.728 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 53.736 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 52.583 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.524 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.764 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.060 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.183 |
| SRR2868004 | Drought Stress (root) | 4.677 |
| SRR2967015 | Control (root) | 4.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.645 |
| SRR9715740 | Leaf | 1.534 |
| SRR9715741 | Leaf | 2.287 |
| SRR9715739 | Root | 1.709 |
| SRR9715742 | Root | 8.623 |
| SRR9715743 | Root | 7.553 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.747 |
| SRR8749028 | MeJA induced 9h | 11.250 |
| SRR8749029 | MeJA induced 9h | 14.001 |
| SRR8749030 | Uninduced | 12.644 |
| SRR8749031 | Uninduced | 4.331 |
| SRR8749032 | Uninduced | 6.924 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.496 |
| SRR8400027 | Control - Root | 9.324 |