Gene detail

Gene detail information of Glyur000386s00015316

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G10000.2	8.00E-103	Thioredoxin family protein
NR	XP_004499576.1	0	PREDICTED: uncharacterized protein LOC101502022 [Cicer arietinum]
COG	YP_693288.1	4.00E-40	hypothetical protein ABO_1568 [Alcanivorax borkumensis SK2]
trEMBL	tr\|I3T9F4\|I3T9F4_LOTJA	1.00E-180	Uncharacterized protein {ECO:0000313\|EMBL:AFK49146.1}

Sequence

Transcript Sequence

>Glyur000386s00015316.1
TTTTTTCTCTAATCATCACATCGCATATCACACCTCCGAGAGAGAGAGAGAACAATCATGATGTCCAACTCTGTTCACCACTCTCCCGGCTGCTGCATAGCCTCGAACAGCAGCGTTAGCGTCATCCCAATTTCCACTCTGAAATGCGCCACCAATAGCAATAGCAATAGGAATTGGGCTTTCCACCACAGATTCATCAGAACTGTTGCTAAATCAAATTCTGATGCACAAACACAAGCCAAAGCCACCCAACCCTCAACAACAACGCCCACATCCTTTCTCTCTTTCCTCTGTCCCTTGCTCAACCTTCTCTCTGGAGGAGATCCCTCTCGACAACGCAACTTTGCTTTGGAGCTGGCAACATCTTCCTTGNCTAGCATATCAAGATTTGCATGGGGAAGAAAATCCAGGGTTGANAGTTCACCAAACACAGAGACAGCTTCAAATCTTCCGACTTGTTTGCAGCTTTTTGAATTTGAGGCATGTCCCTTTTGTAGAAGGGNACGGGAGGCCATGACTGAACTAGATCTTTCTGTAGAGGTCTATCCTTGTCCTAAGGGTTCTGTAAGACACAGAGAAGTGGTCAGAAGAACTGGTGGCAAAGAGCAGTTTCCTTTCCTCGTTGATCAAAATAGTGGCGTTTCANTGTATGAAAGCAGTGATATTGTAAAATACTTGTTTGAGCAATATGGAGAAGGTAGAAGCCCATCATTGGGACTTTTAGAGAGCACTATTTTCACTGGATGGATGCCGACAATTCTACGAGCAGGTAGAGGAATGACACTGTGGGAATATTCTAGGCCTGACCCTCCTCCTGGAAAGTTGGTGCTCTTCTCATATGAGAATAACCCAAATGCTAGAATTGTGCGTGAGGCATTATGTGAATTGGAACTTCCTTACATTCTTCAAAATGTAGGGGAAGGATCTCGCCAAATGAAGTTACTCTTGGACGCTTCTGGATCTAAAGAGGTTCCTTACTTTATTGATCACAACACTGGATTTCAATCTGGGGACTACGGGATGATCTTATCTTACTTGTTCGATACCTATTCATCAGCTATTTTATAGCTTCCACATTCTTCTAATGAAAACTTTTGCAAAATGGGTTTCAAAAGGCAAAACCATTTTGAAAATGTGTGACGAACACTGCCCCCAGGTACAGGCAATAGAAGATTGTAAAGAACTAATGATTATACAAAAGGGTTAGGTCGAATGCATTTCATGCCAATGTTTAAACCTTGTTGAATGACTCAGATCAATGGGGTATTGTGCCAAAAAGATGGAAAATTATGACAAGTTTGGTTTTGAGTGTCCTGCAGAACTCTGTTCAACTTCTTTTGTTTCCTTTATCATTAACGTGCATAGCATGGATCCTATCTGTACAAGCTGCCCTGCAAGGTTAAAATAACATTAGAATTATAAAGACAATTTGTGTATTTTTCAATACCTACCATTTTTCACCGGCCACTGGAATGCATGCTTGTTGGAAAAGGTATGCATCTAAGATACATGTAACGCCATCCAAGCTAGGATAGTTATACAGACCATGGGCTATTTTCAAACAGTAATTTTTTTTTTTTAATTTTGCATTTGGTGATGATATCAAAATGAAACTACCATGAATAGAATTAACAAGAAAACATACAATACAAAGTAGATTTTTGCAAGCAATAATTAACAACCTTTCCCGTGAATATTTGCAATTAGCCATACACACAGAAGGCTTTGCCAATTATTTGCAATTGTATATTTGTATGGCAGTCACAAGATCATAGGAATATAAAACAAAAGCGAGAAAGACCAAATCAAAAGCACAGGATGTATATGGTCAATAAGCTATTTCAAGCAAGAGAAATATGAGTGCTTGTTGCATCATCCCTGATTCATGATCATGCCCCGTAAAAATAAAAAGAAAAATATAATGGACTTCTAGATCATAGATTCTGTGCAGTACAGAGGAGCTAGTGTTGAAGTTGGATCATCAATGTTAGTTAAGTTAGTTAGGATATGTACTATTGTTAGTTATGTGATAGGAGTTTGTTTTGTTAGTGCTGTGAGTGAGTTTTATTCGGGTAGTTAGAATAACAAACTTGTAACAGCATTAAGATTAGAGGCAAGCTGCTATATAAGTCATAGCTAGATGATCATTGGGGGGATGATGTAATTGTTGAGTGATTCACATAGAGAGATATTACTGTGAGTGCAAACTGAGAGTGTGAGATCAGAGAACTTGTACCTGTGTAATCTTTTGAAACTAGTGAAAAGTGAAGCTCGATCAGTGTGGACGTAGAGACCATTGCTCCGAACCACGATAATTCTTTGTGTTCTCTTGGCTTTCTTTCTGCTTTCTTTGTTTACTGGAATTGCTGGTTGATCAGATTTCGGTTTGGGCATAATTCGTAACAGCTAGGTTCGTAAGGTACAGTACAGAAACAAGTGCGTGAAAACAATAAGCAAAAATTAAAATGAGTCTTGGAATGGAAGAATGATATGCGTGGAAAGAAACAGAGAAGAAGAAGACTATAAGACAATGGAGCGAGTGATCACTGATCAGTGGGAAGAATCCAACAATAGTGTCATTAATCATAATCTTAAACACACAACAACATATATAGGACACGGATCCAAAGTGTAAAACTACATATACATATTACATAAAAAGCAGTGAAGCACACAACATAGCTCTTCCACAAGAAGTTCAACACATGATAGTACCCTGACAGATTTTTCCCAACCTAGAACACAGACAAAATCAATATAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00386	763	6624	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0005515 protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000386s00015316.1	PF13417.1	GST_N_3	137	213	1.20E-14

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	8.509
SRR1783600	control	8.874
SRR1783602	moderate drought stress	7.320
SRR1811619	moderate drought stress	7.230

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	6.979
DRR006520	Root Summer glycyrrhizin high producing strain	7.163
DRR006521	Root Winter glycyrrhizin high producing strain	4.031
DRR006522	Root Winter glycyrrhizin high producing strain	4.114
DRR006523	Root Summer glycyrrhizin low producing strain	6.230
DRR006524	Root Summer glycyrrhizin low producing strain	6.543
DRR006525	Leaf Summer glycyrrhizin high producing strain	17.537
DRR006526	Leaf Summer glycyrrhizin high producing strain	17.086

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	5.846
SRR2868004	Drought Stress (root)	6.337
SRR2967015	Control (root)	6.172

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	9.947
SRR9715740	Leaf	13.616
SRR9715741	Leaf	10.582
SRR9715739	Root	1.924
SRR9715742	Root	2.390
SRR9715743	Root	2.808

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.466
SRR8749028	MeJA induced 9h	0.255
SRR8749029	MeJA induced 9h	0.170
SRR8749030	Uninduced	0.247
SRR8749031	Uninduced	0.044
SRR8749032	Uninduced	0.090

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	8.860
SRR8400027	Control - Root	8.845