Gene detail information of Glyur000385s00019813


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G20650.11.00E-36copper transporter 5
NRXP_004501422.12.09E-84PREDICTED: copper transporter 5.1-like [Cicer arietinum]
Swissprottr|Q93VM8|COPT5_ARATH2.00E-48Copper transporter 5
trEMBLtr|I3S402|I3S402_LOTJA5.00E-84Uncharacterized protein {ECO:0000313|EMBL:AFK34994.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00385170769171200+


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
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Gene Ontology

biological_process

GO:0035434  copper ion transmembrane transport


cellular_component

GO:0016021  integral component of membrane


molecular_function

GO:0005375  copper ion transmembrane transporter activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000385s00019813.1PF04145.10Ctr21261.80E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control78.005
SRR1783600control76.547
SRR1783602moderate drought stress61.790
SRR1811619moderate drought stress68.699

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain33.971
DRR006520Root Summer glycyrrhizin high producing strain35.446
DRR006521Root Winter glycyrrhizin high producing strain16.472
DRR006522Root Winter glycyrrhizin high producing strain18.274
DRR006523Root Summer glycyrrhizin low producing strain54.851
DRR006524Root Summer glycyrrhizin low producing strain61.172
DRR006525Leaf Summer glycyrrhizin high producing strain21.935
DRR006526Leaf Summer glycyrrhizin high producing strain21.349

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)122.339
SRR2868004Drought Stress (root)146.967
SRR2967015Control (root)132.626

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf158.214
SRR9715740Leaf146.088
SRR9715741Leaf134.696
SRR9715739Root292.248
SRR9715742Root161.408
SRR9715743Root197.689

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h29.746
SRR8749028MeJA induced 9h24.525
SRR8749029MeJA induced 9h19.586
SRR8749030Uninduced47.095
SRR8749031Uninduced30.121
SRR8749032Uninduced39.587

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root195.986
SRR8400027Control - Root207.878

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved