Gene detail information of Glyur000385s00019810 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G72510.2 | 8.00E-25 | Protein of unknown function (DUF1677) |
| NR | AES73484.2 | 2.30E-61 | DUF1677 family protein [Medicago truncatula] |
| trEMBL | tr|G7J943|G7J943_MEDTR | 9.00E-62 | DUF1677 family protein {ECO:0000313|EMBL:AES73484.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00385 | 157848 | 159653 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000385s00019810.1 | PF07911.8 | DUF1677 | 124 | 213 | 1.40E-31 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.827 |
| SRR1783600 | control | 0.908 |
| SRR1783602 | moderate drought stress | 2.891 |
| SRR1811619 | moderate drought stress | 2.923 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.088 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.799 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 47.366 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 45.374 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 20.668 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 19.767 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.628 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.515 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.946 |
| SRR2868004 | Drought Stress (root) | 7.015 |
| SRR2967015 | Control (root) | 6.744 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.947 |
| SRR9715740 | Leaf | 1.888 |
| SRR9715741 | Leaf | 2.879 |
| SRR9715739 | Root | 3.435 |
| SRR9715742 | Root | 2.597 |
| SRR9715743 | Root | 2.144 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.196 |
| SRR8749028 | MeJA induced 9h | 37.236 |
| SRR8749029 | MeJA induced 9h | 27.036 |
| SRR8749030 | Uninduced | 53.001 |
| SRR8749031 | Uninduced | 13.151 |
| SRR8749032 | Uninduced | 29.194 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.192 |
| SRR8400027 | Control - Root | 3.934 |