Gene detail information of Glyur000385s00019800 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G19210.1 | 7.00E-33 | Integrase-type DNA-binding superfamily protein |
| NR | XP_003527767.1 | 6.95E-77 | PREDICTED: ethylene-responsive transcription factor ERF036 [Glycine max] |
| Swissprot | tr|Q84QC2|ERF17_ARATH | 8.00E-40 | Ethylene-responsive transcription factor ERF017 |
| trEMBL | tr|V7ATD0|V7ATD0_PHAVU | 7.00E-72 | Uncharacterized protein {ECO:0000313|EMBL:ESW08907.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00385 | 83273 | 84121 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000385s00019800.1 | PF00847.15 | AP2 | 34 | 83 | 2.40E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.173 |
| SRR1811619 | moderate drought stress | 0.179 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.377 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.046 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.075 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.080 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.594 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.713 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.617 |
| SRR2868004 | Drought Stress (root) | 1.382 |
| SRR2967015 | Control (root) | 8.308 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 28.794 |
| SRR9715740 | Leaf | 8.577 |
| SRR9715741 | Leaf | 20.405 |
| SRR9715739 | Root | 68.137 |
| SRR9715742 | Root | 72.156 |
| SRR9715743 | Root | 68.803 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.276 |
| SRR8749028 | MeJA induced 9h | 0.079 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 2.020 |
| SRR8749031 | Uninduced | 0.206 |
| SRR8749032 | Uninduced | 1.881 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.600 |
| SRR8400027 | Control - Root | 1.734 |