Gene detail information of Glyur000384s00022289 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G27385.1 | 2.00E-54 | |
| NR | XP_004502291.1 | 7.37E-121 | PREDICTED: uncharacterized protein LOC101506977 [Cicer arietinum] |
| trEMBL | tr|I1LN76|I1LN76_SOYBN | 9.00E-117 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G37030.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00384 | 139246 | 142624 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000384s00022289.1 | PF04359.9 | DUF493 | 114 | 197 | 4.60E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.506 |
| SRR1783600 | control | 15.416 |
| SRR1783602 | moderate drought stress | 10.158 |
| SRR1811619 | moderate drought stress | 10.083 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.077 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.800 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 41.899 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 40.987 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.786 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.923 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 94.127 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 93.180 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.675 |
| SRR2868004 | Drought Stress (root) | 28.079 |
| SRR2967015 | Control (root) | 28.704 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 69.365 |
| SRR9715740 | Leaf | 102.397 |
| SRR9715741 | Leaf | 67.180 |
| SRR9715739 | Root | 6.269 |
| SRR9715742 | Root | 10.676 |
| SRR9715743 | Root | 8.471 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.741 |
| SRR8749028 | MeJA induced 9h | 24.226 |
| SRR8749029 | MeJA induced 9h | 20.201 |
| SRR8749030 | Uninduced | 29.886 |
| SRR8749031 | Uninduced | 23.735 |
| SRR8749032 | Uninduced | 19.384 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.627 |
| SRR8400027 | Control - Root | 22.281 |