Gene detail information of Glyur000384s00022285 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G27950.1 | 8.00E-34 | glycosylphosphatidylinositol-anchored lipid protein transfer 1 |
| NR | KHN44444.1 | 1.42E-77 | Putative GPI-anchored protein [Glycine soja] |
| Swissprot | tr|Q9C7F7|LTPG1_ARATH | 7.00E-41 | Non-specific lipid transfer protein GPI-anchored 1 (Precursor) |
| trEMBL | tr|C6SWF2|C6SWF2_SOYBN | 1.00E-74 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU13575.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00384 | 123011 | 126079 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000384s00022285.1 | PF14368.1 | LTP_2 | 34 | 115 | 9.00E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.594 |
| SRR1783600 | control | 7.451 |
| SRR1783602 | moderate drought stress | 8.091 |
| SRR1811619 | moderate drought stress | 8.122 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.827 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.145 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.347 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.337 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 82.487 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 80.180 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.156 |
| SRR2868004 | Drought Stress (root) | 19.616 |
| SRR2967015 | Control (root) | 11.455 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 87.622 |
| SRR9715740 | Leaf | 75.502 |
| SRR9715741 | Leaf | 38.169 |
| SRR9715739 | Root | 6.951 |
| SRR9715742 | Root | 26.493 |
| SRR9715743 | Root | 23.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.149 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 51.700 |
| SRR8400027 | Control - Root | 95.331 |