Gene detail information of Glyur000384s00022274 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G27300.1 | 2.00E-20 | |
| NR | KHN24055.1 | 2.33E-72 | hypothetical protein glysoja_025228 [Glycine soja] |
| trEMBL | tr|C6SZ09|C6SZ09_SOYBN | 2.00E-71 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G00850.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00384 | 39021 | 41341 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.188 |
| SRR1783600 | control | 2.483 |
| SRR1783602 | moderate drought stress | 3.365 |
| SRR1811619 | moderate drought stress | 3.393 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.074 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.003 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.120 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.786 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.559 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.740 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.765 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.754 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.620 |
| SRR2868004 | Drought Stress (root) | 17.206 |
| SRR2967015 | Control (root) | 10.749 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.440 |
| SRR9715740 | Leaf | 2.140 |
| SRR9715741 | Leaf | 2.145 |
| SRR9715739 | Root | 1.920 |
| SRR9715742 | Root | 3.721 |
| SRR9715743 | Root | 3.199 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.404 |
| SRR8749028 | MeJA induced 9h | 5.467 |
| SRR8749029 | MeJA induced 9h | 3.796 |
| SRR8749030 | Uninduced | 5.036 |
| SRR8749031 | Uninduced | 1.578 |
| SRR8749032 | Uninduced | 3.673 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.593 |
| SRR8400027 | Control - Root | 6.309 |