Gene detail information of Glyur000384s00022271 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G63500.1 | 2.00E-12 | Protein of unknown function (DUF 3339) |
| NR | XP_003553183.1 | 6.33E-16 | PREDICTED: uncharacterized protein LOC100527578 [Glycine max] |
| trEMBL | tr|I1MYD6|I1MYD6_SOYBN | 2.00E-16 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G00830.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00384 | 18399 | 18872 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000384s00022271.1 | PF11820.3 | DUF3339 | 1 | 41 | 6.70E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.194 |
| SRR1783600 | control | 1.054 |
| SRR1783602 | moderate drought stress | 0.396 |
| SRR1811619 | moderate drought stress | 0.871 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.653 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.208 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 134.510 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 117.653 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.072 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.071 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.106 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.282 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.607 |
| SRR2868004 | Drought Stress (root) | 2.976 |
| SRR2967015 | Control (root) | 5.166 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.344 |
| SRR9715740 | Leaf | 1.749 |
| SRR9715741 | Leaf | 1.141 |
| SRR9715739 | Root | 1.283 |
| SRR9715742 | Root | 10.785 |
| SRR9715743 | Root | 10.185 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.082 |
| SRR8749028 | MeJA induced 9h | 0.912 |
| SRR8749029 | MeJA induced 9h | 0.772 |
| SRR8749030 | Uninduced | 1.617 |
| SRR8749031 | Uninduced | 0.646 |
| SRR8749032 | Uninduced | 0.877 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.444 |
| SRR8400027 | Control - Root | 1.463 |