Gene detail information of Glyur000383s00019453 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G09980.1 | 4.00E-21 | Family of unknown function (DUF662) |
| NR | XP_004496189.1 | 3.14E-101 | PREDICTED: RAB6-interacting golgin-like [Cicer arietinum] |
| trEMBL | tr|C6TNA2|C6TNA2_SOYBN | 4.00E-99 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G34670.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00383 | 54774 | 56437 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000383s00019453.1 | PF04949.8 | Transcrip_act | 12 | 168 | 1.60E-64 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.091 |
| SRR1783600 | control | 2.990 |
| SRR1783602 | moderate drought stress | 2.315 |
| SRR1811619 | moderate drought stress | 2.036 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.458 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.563 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.791 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.607 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.113 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.197 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.590 |
| SRR2868004 | Drought Stress (root) | 4.275 |
| SRR2967015 | Control (root) | 5.334 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.262 |
| SRR9715740 | Leaf | 0.095 |
| SRR9715741 | Leaf | 0.294 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.992 |
| SRR9715743 | Root | 1.213 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.633 |
| SRR8749028 | MeJA induced 9h | 0.459 |
| SRR8749029 | MeJA induced 9h | 0.348 |
| SRR8749030 | Uninduced | 0.089 |
| SRR8749031 | Uninduced | 0.515 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.465 |
| SRR8400027 | Control - Root | 3.199 |