Gene detail

Gene detail information of Glyur000383s00019447.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G04660.1	0	cytochrome P450, family 77, subfamily A, polypeptide 4
NR	XP_003556278.2	0	PREDICTED: cytochrome P450 77A3-like [Glycine max]
COG	YP_001546937.1	9.00E-31	cytochrome P450 [Herpetosiphon aurantiacus DSM 785]
Swissprot	tr\|O48928\|C77A3_SOYBN	0	Cytochrome P450 77A3
trEMBL	tr\|I1NHN6\|I1NHN6_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA20G32930.1}

Sequence

Transcript Sequence

>Glyur000383s00019447.1
ATGGCTACTCTCACTTTAGCTTCGCTTTCCTCCCACTACCACCTCTTCTTCACTGCCTTGGCCTTCCTTCTATCATGCCTCATTTTCCTTCTCACCCAGAAAACCAAAAACTCGAAGAAGCTCAACCTTCCCCCAGGTCCACCTGGGTGGCCAATTGTCGGAAACCTCTTCCAGGTGGCACGTTCTGGGAAGCCCTTCATGGAATACGTGAACGACCTGAGATCAAAATACGGTTCCATCTTCACCCTCAAGATGGGAACCAGAACAATGATAATCCTAACCGACGCGAAACTGGTTCACGAGGCACTGATCCAAAAGGGTGCTATCTACGCAACAAGACCACCGGAGAATCCAACGAGGAACATCTTCAGCGCAAACAAGTACACCGTGAACGCCGCTTACTATGGCCCCGTTTGGAAGTCCCTGAGGAGGAACATGGTGCAGAACATGCTTAGCTCTAGCAGAATCAAGGAGTTTCGTGGCGTCAGGGACAACGCNATGGATAAACTCATCAATAGACTCAGGGCAGAGGCAGAGAAAAACGACGGTGTCGTTTGGGTTCTCAAAGATGCTAGGTTTGCCGTTTTCTGCATACTCGTGGCCATGTGTTTTGGTCTTGACATGGATGAAGAAAAGCTCGAGAGAATAGATCAAGTNATGAAGAGTGTATTAATAGCACTTGATCCAAGAATCGATGATTTCCTTCCAATTCTAGGCCCCTTTTTCTCAAAACAGAGAAAGAGGGTTTTAGAAGTTCGTAAAGAACAGGTAGAATTCATGGTTCCTTTCATTAAACAGAGGAGAAGGGCGATTCAGAATCCTGGTTCAGATCACACCGCTACAACGTTTTCCTATTTGGATACGCTGTTCGATATCAAGGTTGAAGGGAAGAAATCAGCACCNTCAGATGCAGAATTGGTGTCTCTATGCTCTGAATTTCTCAACGGAGGAACTGACACGACAGCAACGGCGGTTGAATGGGGAATGGCGCAGCTAATTGCAAACCCCGAGATTCAAACGAAGCTGTATGAAGAAATTAAGAATACAGTCGGAGACAAGAAGGTGGATGAGAAGGATGTTGAGAAAATGCCTTATTTACATGCTGTGGTGAAGGAGTTGTTAAGGAAGCATCCACCAACACATTTTGTGCTAACACATGCTGTGACAGAGCCAACTACTCTTGCAGGGTATGATATACCAATTGATGCGAACATTGAGATTTATACTCCGGCGATTGGTGAGGACCCGAAATTGTGGTCAAACCCAGAGAGGTTTGACCCGGAGAGGTTTATAACAGGGGGTGAGGAAGCGGATATAACAGGGGTAACTGGNGTGAAGATGATGCCGTTTGGTGTTGGGAGAAGGATATGTCCTGGTTTGGCTTTGGCTACGGTGCATATTCATTTGATGATGGCGAGGATGGTGCAGGAGTTTGAGTGGGGTGCGTACCCACCGGGGAAGAAGGTGGACTTCACTGGTAAGATGGAGTTTACCGTTGTCATGAAGGAGTCTCTAAGAGCTACCATTAAGCCAAGATCATCAGGAGGGAAAACAGAAGCTTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00383	26118	27680	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP77A4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000383s00019447.1	PF00067.17	p450	44	503	1.60E-111

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.397
SRR1783600	control	0.423
SRR1783602	moderate drought stress	0.292
SRR1811619	moderate drought stress	0.278

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.278
DRR006520	Root Summer glycyrrhizin high producing strain	0.275
DRR006521	Root Winter glycyrrhizin high producing strain	0.071
DRR006522	Root Winter glycyrrhizin high producing strain	0.070
DRR006523	Root Summer glycyrrhizin low producing strain	1.342
DRR006524	Root Summer glycyrrhizin low producing strain	1.397
DRR006525	Leaf Summer glycyrrhizin high producing strain	68.251
DRR006526	Leaf Summer glycyrrhizin high producing strain	68.142

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.217
SRR2868004	Drought Stress (root)	0.141
SRR2967015	Control (root)	0.131

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	34.937
SRR9715740	Leaf	22.064
SRR9715741	Leaf	21.480
SRR9715739	Root	0.842
SRR9715742	Root	2.340
SRR9715743	Root	1.961

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.046
SRR8749028	MeJA induced 9h	0.310
SRR8749029	MeJA induced 9h	0.234
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.073

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.675
SRR8400027	Control - Root	2.614