Gene detail

Gene detail information of Glyur000381s00016145

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G26480.1	8.00E-124	general regulatory factor 12
NR	XP_004505365.1	2.05E-172	PREDICTED: 14-3-3-like protein GF14 iota-like [Cicer arietinum]
Swissprot	tr\|Q9C5W6\|14312_ARATH	2.00E-155	14-3-3-like protein GF14 iota
trEMBL	tr\|I1NDI4\|I1NDI4_SOYBN	6.00E-172	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA20G03120.1}

Sequence

Transcript Sequence

>Glyur000381s00016145.1
CTAAGGATTACAGCTATGGCATGCAAGTCCTTCCGATATGCGCGCTTTCCTCTTTCAAACAAAACCACTAATCCAACGGTCCAGATTCGGTCTTACCCTCTCCCCTCACAAGTCGCTCCATCTATATAACCACTCCACCCCACCTTCCCTTCTTCCTCGCATTCTTCTTCTTCTCCTCTCCGCAAAACACATTCANACCGGCCATTACACAAACGTGTTTTTCTTTGCCTCTGACACAACAATGTCCACGGAGAAGGAGAGAGAGACNCAGGTTTACATGGCCAAGCTTGCCGAGCAAGCCGAGAGATATGAAGAAATGGTTGAGTGTATGAAGACAGTAGCAAAACTTGATCTTGATCTAACCGTGGAAGAGAGGAACCTGCTCTCAGTGGGATATAAAAATGTGATTGGTGCACGGAGAGCCTCTTGGCGAATTATGTCTTCAATTGAACAGAAGGAAGAGTCTAAGGGAAACGAGAACAATGTGAAACTGATCAAGAGTTACCGCCAAAAGGTGGAGGAGGAACTGTCCAAGATTTGCAGTGACATTCTCACAATTATTGACCAGCATCTCATTCCTTCTTCCACCAACGGAGAAGCTACCGTTTTCTACTACAAGATGAAAGGTGACTATTGTCGATACCTTGCTGAGTTCAAGACCGATCAAGAAAGGAAGGAGGCAGCTGAGCAGTCACTAAAGGCATATGAGGCTGCTTCAGCCACTGCAAACACAGATCTTCCATCAACACATCCAATCCGTCTTGGACTTGCACTCAACTTCTCTGTCTTCTATTATGAGATATTGAACTCTCCTGAAAGGCAAGTTACTTACTTATACTCTTTGGCCTGTCATTTGGCTAAGCAAGCATTCGATGAGGCAATTGCGGAGTTAGACACCTTGAATGAAGAGTCATACAAGGACAGCACTTTGATCATGCAGTTGTTGAGAGACAACCTGACTCTCTGGACCTCCGATTTACCTGAGGATGGAGGGGATGAAATCAAAACAGAAGAAGCCAAACCTGCTGAACCTGAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00381	154354	158067	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0019904 protein domain specific binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000381s00016145.1	PF00244.15	2014/3/3	75	317	1.20E-111

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.140
SRR1783600	control	3.122
SRR1783602	moderate drought stress	2.276
SRR1811619	moderate drought stress	2.214

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.402
DRR006520	Root Summer glycyrrhizin high producing strain	2.357
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.025
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.594
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.635

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	9.185
SRR2868004	Drought Stress (root)	3.986
SRR2967015	Control (root)	2.281

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.540
SRR9715740	Leaf	8.957
SRR9715741	Leaf	0.994
SRR9715739	Root	3.003
SRR9715742	Root	1.898
SRR9715743	Root	1.954

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	2.811
SRR8749028	MeJA induced 9h	3.301
SRR8749029	MeJA induced 9h	2.654
SRR8749030	Uninduced	4.215
SRR8749031	Uninduced	1.478
SRR8749032	Uninduced	0.781

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	10.451
SRR8400027	Control - Root	10.224