Gene detail information of Glyur000381s00016137 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G26580.1 | 2.00E-60 | |
| NR | XP_007158628.1 | 0 | hypothetical protein PHAVU_002G168600g [Phaseolus vulgaris] |
| Swissprot | tr|Q9LDD4|ARID2_ARATH | 8.00E-25 | AT-rich interactive domain-containing protein 2 |
| trEMBL | tr|V7CKA5|V7CKA5_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW30622.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00381 | 106106 | 109249 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.243 |
| SRR1783600 | control | 3.159 |
| SRR1783602 | moderate drought stress | 4.267 |
| SRR1811619 | moderate drought stress | 4.180 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.311 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.116 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.780 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.779 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.769 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.502 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.228 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.093 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.732 |
| SRR2868004 | Drought Stress (root) | 17.266 |
| SRR2967015 | Control (root) | 20.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 12.865 |
| SRR9715740 | Leaf | 13.255 |
| SRR9715741 | Leaf | 16.620 |
| SRR9715739 | Root | 2.888 |
| SRR9715742 | Root | 8.659 |
| SRR9715743 | Root | 7.679 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.729 |
| SRR8749028 | MeJA induced 9h | 17.147 |
| SRR8749029 | MeJA induced 9h | 12.159 |
| SRR8749030 | Uninduced | 15.062 |
| SRR8749031 | Uninduced | 34.230 |
| SRR8749032 | Uninduced | 21.350 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.637 |
| SRR8400027 | Control - Root | 11.524 |