Gene detail information of Glyur000380s00017143 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G31410.1 | 5.00E-53 | |
| NR | XP_003624491.1 | 1.63E-100 | hypothetical protein MTR_7g083930 [Medicago truncatula] |
| trEMBL | tr|B7FGN6|B7FGN6_MEDTR | 6.00E-101 | Uncharacterized protein {ECO:0000313|EMBL:AES80709.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00380 | 126638 | 127204 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 82.252 |
| SRR1783600 | control | 81.817 |
| SRR1783602 | moderate drought stress | 143.847 |
| SRR1811619 | moderate drought stress | 141.559 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 271.137 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 268.731 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 174.088 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 169.298 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 227.932 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 228.203 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 63.640 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 64.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 115.654 |
| SRR2868004 | Drought Stress (root) | 97.192 |
| SRR2967015 | Control (root) | 99.910 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 48.761 |
| SRR9715740 | Leaf | 55.547 |
| SRR9715741 | Leaf | 50.098 |
| SRR9715739 | Root | 59.580 |
| SRR9715742 | Root | 93.339 |
| SRR9715743 | Root | 81.094 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 381.595 |
| SRR8749028 | MeJA induced 9h | 134.456 |
| SRR8749029 | MeJA induced 9h | 248.385 |
| SRR8749030 | Uninduced | 54.016 |
| SRR8749031 | Uninduced | 58.589 |
| SRR8749032 | Uninduced | 202.269 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 115.592 |
| SRR8400027 | Control - Root | 95.376 |