Gene detail information of Glyur000379s00015024 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G08490.1 | 9.00E-49 | |
| NR | XP_003545979.2 | 0 | PREDICTED: uncharacterized protein LOC100792233 [Glycine max] |
| trEMBL | tr|I1MJP4|I1MJP4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G43000.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00379 | 124811 | 129049 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.448 |
| SRR1783600 | control | 6.599 |
| SRR1783602 | moderate drought stress | 7.411 |
| SRR1811619 | moderate drought stress | 7.571 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 22.445 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.225 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.643 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 13.044 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.284 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.284 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.966 |
| SRR2868004 | Drought Stress (root) | 18.798 |
| SRR2967015 | Control (root) | 21.667 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.233 |
| SRR9715740 | Leaf | 0.025 |
| SRR9715741 | Leaf | 0.169 |
| SRR9715739 | Root | 1.636 |
| SRR9715742 | Root | 4.777 |
| SRR9715743 | Root | 4.725 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.192 |
| SRR8749028 | MeJA induced 9h | 0.099 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.024 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.504 |
| SRR8400027 | Control - Root | 14.985 |