Gene detail

Gene detail information of Glyur000379s00015020.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G13780.1	3.00E-83	Acyl-CoA N-acyltransferases (NAT) superfamily protein
NR	XP_004514569.1	1.83E-128	PREDICTED: N-alpha-acetyltransferase 10-like [Cicer arietinum]
COG	YP_004781726.1	7.00E-32	ribosomal-protein-alanine acetyltransferase [Pyrolobus fumarii 1A]
trEMBL	tr\|V7AJP6\|V7AJP6_PHAVU	2.00E-115	Uncharacterized protein {ECO:0000313\|EMBL:ESW05485.1}

Sequence

Transcript Sequence

>Glyur000379s00015020.1
AGTAGAGAGACGCTTGCTCATTCCATCCCCAATTCCCAATTTCGTTCCTAATCCTGAAGCCCTAAAACAGTGGAATCGAAGGGAGCATAGCAGAGAGAGAGCGATGGTGTGCATAAGGAAGGCGACGGTGAATGACTTGCTGGCGATGCAGGCGTGCAACCTGTTCTGCCTGCCGGAGAACTACCAGATGAAGTACTACCTGTANCACATCCTCTCCTGGCCTCAGCTCCTCTACGTCGCCGAGGACTACAACGGCCGCATCGTCGGCTACGTCCTCGCCAAGATGGAGGAGGAGACCAACGAGTGCCACGGCCACATCACTTCCCTCGCCGTCCTCCGCACCCACCGCAAGCTCGGCCTCGCCACCAAGCTCATGACCGCNGCCCAAAACGCCATGGAACAGGTGTTTGGTGCTGAGTATGTCTCGCTGCATGTCAGGAAGAGCAACCGTGCGGCTTTTAATTTGTACACGGAGACCTTGGGGTACAAAATCCATGATGTGGAGGCCAAGTACTATGCTGATGGGGAGGATGCTTATGACATGAGGAAGCAACTCAAGGGGAAGCAGATGCATCAGCACCAGCATCATCACCATCACCATCATCACCACCACCACCATCATGAGCATGGCGGTGGTTGTTGTTCCGGGGAGGCGAAGGCAGACAAGGCGGAGACTAAGGGGAATGCAAAAGCCACTTGATCGTGGAAGCAGTTACCCCCCACCCCTATTGTTTTTGTTTCTTGAATGTTTTAATTGTGAAAAAATTGGGACTTTGTTGGCTAGTTTGAAATTGATGAGATGGTAAGATGTGGTTGAATTATGTNTGTGCACTTGTTGTAGGTTTATTTAGTTATGTTGACTATTTTGTCTCAACAATATGAATTTTTACTCTTTTTTGTGAATAGTTGCACTTGTGGTTCTTGATGCTTGAATGGGTATGATTGCATTCCTGTATCTCTGTTGTTTAGTCATGGGGAATTATTTGGGCTTGTTATGATGATTGTTTTGAAGTTTGTGTTCTCTTAGTTTGTTGAGGTGCATTGTGTTATAAATATGATTAATAAATGAGTGGAGACTGTGGTTGATGATAGCAGAGTAGTATAGTGTCGGTGCTGTGTGGTGTAACTTCCAGGTGGTGTAGGAGCTCCATTGTGGAGCGTTTGCCAGTAGCAGACAGATAGTGGCTGTTTGTGGCCC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00379	106496	108156	+

Gene family

Gene family	subfamily
Transcription Factors Family	GNAT

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0008080 N-acetyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000379s00015020.1	PF00583.19	Acetyltransf_1	49	129	8.60E-16

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	62.845
SRR1783600	control	61.351
SRR1783602	moderate drought stress	50.353
SRR1811619	moderate drought stress	48.006

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	67.681
DRR006520	Root Summer glycyrrhizin high producing strain	66.045
DRR006521	Root Winter glycyrrhizin high producing strain	71.483
DRR006522	Root Winter glycyrrhizin high producing strain	67.077
DRR006523	Root Summer glycyrrhizin low producing strain	102.764
DRR006524	Root Summer glycyrrhizin low producing strain	102.420
DRR006525	Leaf Summer glycyrrhizin high producing strain	37.677
DRR006526	Leaf Summer glycyrrhizin high producing strain	37.400

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	61.885
SRR2868004	Drought Stress (root)	58.155
SRR2967015	Control (root)	59.395

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	41.638
SRR9715740	Leaf	38.399
SRR9715741	Leaf	43.768
SRR9715739	Root	120.207
SRR9715742	Root	63.419
SRR9715743	Root	69.508

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	93.583
SRR8749028	MeJA induced 9h	55.075
SRR8749029	MeJA induced 9h	57.701
SRR8749030	Uninduced	32.461
SRR8749031	Uninduced	12.528
SRR8749032	Uninduced	48.483

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	62.448
SRR8400027	Control - Root	60.050