Gene detail information of Glyur000379s00015015 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003538058.2 | 4.76E-145 | PREDICTED: uncharacterized protein LOC100799023 [Glycine max] |
| Swissprot | tr|A2Z9A6|U496D_ORYSI | 8.00E-13 | UPF0496 protein 4 |
| trEMBL | tr|I1LST3|I1LST3_SOYBN | 2.00E-150 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G17710.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00379 | 86523 | 87503 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.732 |
| SRR1783600 | control | 0.710 |
| SRR1783602 | moderate drought stress | 1.756 |
| SRR1811619 | moderate drought stress | 1.828 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.146 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.068 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.365 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.341 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.533 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 26.026 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.985 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.829 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.841 |
| SRR2868004 | Drought Stress (root) | 16.568 |
| SRR2967015 | Control (root) | 22.722 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 87.992 |
| SRR9715740 | Leaf | 68.217 |
| SRR9715741 | Leaf | 160.980 |
| SRR9715739 | Root | 11.374 |
| SRR9715742 | Root | 28.306 |
| SRR9715743 | Root | 28.063 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 110.464 |
| SRR8749028 | MeJA induced 9h | 378.419 |
| SRR8749029 | MeJA induced 9h | 204.774 |
| SRR8749030 | Uninduced | 208.495 |
| SRR8749031 | Uninduced | 602.344 |
| SRR8749032 | Uninduced | 313.459 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.810 |
| SRR8400027 | Control - Root | 4.387 |