Gene detail information of Glyur000377s00019597 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G27890.1 | 1.00E-10 | HSP20-like chaperones superfamily protein |
| NR | XP_004498517.1 | 5.75E-14 | PREDICTED: protein BOBBER 1-like [Cicer arietinum] |
| Swissprot | tr|Q9STN7|BOB2_ARATH | 3.00E-14 | Protein BOBBER 2 |
| trEMBL | tr|G7KP93|G7KP93_MEDTR | 2.00E-13 | Uncharacterized protein {ECO:0000313|EMBL:AES75968.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00377 | 8568 | 9107 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 34.836 |
| SRR1783600 | control | 33.063 |
| SRR1783602 | moderate drought stress | 67.916 |
| SRR1811619 | moderate drought stress | 66.775 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.259 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.366 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 22.359 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 20.826 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 29.192 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 26.807 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.055 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.650 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.750 |
| SRR2868004 | Drought Stress (root) | 13.564 |
| SRR2967015 | Control (root) | 15.322 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.821 |
| SRR9715740 | Leaf | 5.424 |
| SRR9715741 | Leaf | 9.011 |
| SRR9715739 | Root | 1.038 |
| SRR9715742 | Root | 5.963 |
| SRR9715743 | Root | 6.962 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 29.133 |
| SRR8749028 | MeJA induced 9h | 27.677 |
| SRR8749029 | MeJA induced 9h | 17.348 |
| SRR8749030 | Uninduced | 15.671 |
| SRR8749031 | Uninduced | 6.833 |
| SRR8749032 | Uninduced | 8.457 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 52.596 |
| SRR8400027 | Control - Root | 46.090 |