Gene detail

Gene detail information of Glyur000376s00018698.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G18250.1	1.00E-85	receptor serine/threonine kinase, putative
NR	XP_004498441.1	0	PREDICTED: probable receptor-like protein kinase At5g39020-like [Cicer arietinum]
COG	YP_001958461.1	2.00E-26	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q9FID6\|Y5392_ARATH	1.00E-95	Probable receptor-like protein kinase At5g39020 (Precursor)
trEMBL	tr\|A0A072UVX8\|A0A072UVX8_MEDTR	0	Stress-induced receptor-like kinase {ECO:0000313\|EMBL:KEH33223.1}

Sequence

Transcript Sequence

>Glyur000376s00018698.1
ATGCCAATAAGGTATTCATTCCAAGAGATAAAGAAGATGACTAAAAATTTCAAGCACAAGTTGGGTGAAGGGGGCTATGGCTCTGTTTATAAAGGAAAGCTACGCAGTGGTCCTTTTGTAGCCATAAAGATGTTGGGCAAACCTAAGGCTAATGGTCAAGAATTCATNAGTGAAGTTGCAACCATAGGACGAATACATCATTCCAATGTAGTGCGGCTTATTGGATTTTGTGCTGAGGCATCAAAACGTGCTCTTGTTTATGAATTCATGCCCAATGGATCTCTGGATAAATATATTTTGTCCAATAAAGAGGATATTATCTTTTTAACTTGTGAGCAAATGTATGAGATATCCCTTGGAGTGGCTCGAGGTATTGCTTATCTGCATCAAGGCTGTGACATGCAAATTTTGCATTTTGATATCAAGCCCCACAACATTCTTCTCGATGAGAATTTTGTCCCAAAGGTTTCAGATTTTGGTCTTGCAAAGCTTTATCCTAATGACAATAGCATTGTCACTTTGACTGCTGCAAGAGGAACAATTGGTTACATGGCTCCAGAATTGTTCTACAAAAATATTGGAGGGGTGTCNTACAAGGCTGATGTTTATAGCTTTGGAATGCTTTTNATGGAAATGGCAAGTAAGAGAAGAAATTTAAATCCACATGCAGATCGTTCAAGNCANCTTTTCTTTCCCTTTTGGATTTANAATCAATTGACGGAAGAAAGGGAGATAGAAATGGAAGAAATNACTGATGNTGAAAAGAACAATGTGAANAAGATGTTCATGGTTGCATTATGGTGCATACAGTTAAAACCCAGTGATCGTCCTTCAATGAACAAAGTGATAGAGATGCTCGAAGGAGATATTCAGAACATTGAAATGCCTCCAAAGCCTTCTCTGTATCCAAATGAAACGATTCAGGGAGATCTCGAAATCAACTCTGATGAAATTGTGTCAGATGTTGCTACTAGCTCTGTTTGTTTTCTTGAGGAAACTAATACAGAGCCTTTACTGAAGTATTCTGCTTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00376	169357	170388	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.9.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000376s00018698.1	PF00069.20	Pkinase	18	284	2.40E-48

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.708
SRR1783600	control	0.967
SRR1783602	moderate drought stress	0.198
SRR1811619	moderate drought stress	0.219

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.158
DRR006520	Root Summer glycyrrhizin high producing strain	0.261
DRR006521	Root Winter glycyrrhizin high producing strain	0.108
DRR006522	Root Winter glycyrrhizin high producing strain	0.211
DRR006523	Root Summer glycyrrhizin low producing strain	0.065
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	19.894
DRR006526	Leaf Summer glycyrrhizin high producing strain	19.248

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.602
SRR2868004	Drought Stress (root)	1.035
SRR2967015	Control (root)	2.337

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	66.814
SRR9715740	Leaf	100.269
SRR9715741	Leaf	136.695
SRR9715739	Root	0.048
SRR9715742	Root	2.082
SRR9715743	Root	2.850

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.055

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.366
SRR8400027	Control - Root	0.685