Gene detail information of Glyur000376s00018691 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11760.1 | 3.00E-12 | |
| NR | KHN16261.1 | 3.20E-45 | Hypothetical protein glysoja_046578 [Glycine soja] |
| trEMBL | tr|I1KLM2|I1KLM2_SOYBN | 1.00E-45 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G31850.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00376 | 127958 | 129824 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000376s00018691.1 | PF08576.5 | DUF1764 | 68 | 175 | 7.20E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 12.293 |
| SRR1783600 | control | 11.278 |
| SRR1783602 | moderate drought stress | 9.118 |
| SRR1811619 | moderate drought stress | 9.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.723 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 17.921 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.940 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.799 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 24.673 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.151 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.990 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.637 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 36.935 |
| SRR2868004 | Drought Stress (root) | 32.679 |
| SRR2967015 | Control (root) | 35.654 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.191 |
| SRR9715740 | Leaf | 23.714 |
| SRR9715741 | Leaf | 17.754 |
| SRR9715739 | Root | 2.260 |
| SRR9715742 | Root | 9.145 |
| SRR9715743 | Root | 8.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 23.356 |
| SRR8749028 | MeJA induced 9h | 12.201 |
| SRR8749029 | MeJA induced 9h | 12.065 |
| SRR8749030 | Uninduced | 7.662 |
| SRR8749031 | Uninduced | 2.051 |
| SRR8749032 | Uninduced | 3.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 24.892 |
| SRR8400027 | Control - Root | 29.038 |