Gene detail

Gene detail information of Glyur000376s00018690

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G53160.2	4.00E-84	regulatory components of ABA receptor 3
NR	XP_004498400.1	1.22E-124	PREDICTED: LOW QUALITY PROTEIN: abscisic acid receptor PYL8-like [Cicer arietinum]
COG	YP_005438895.1	6.00E-08	MxaD/XoxI protein, putative [Rubrivivax gelatinosus IL144]
Swissprot	tr\|Q9FGM1\|PYL8_ARATH	2.00E-106	Abscisic acid receptor PYL8
trEMBL	tr\|I1LX70\|I1LX70_SOYBN	8.00E-123	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G08120.1}

Sequence

Transcript Sequence

>Glyur000376s00018690.1
TTGGGATAATAACAAGAGCTTTGGGAGCAGTAGTTTCCACGATCCGTGGCGGTGACTCTGACTATCACACGCATATCCTTCTTCTCATTCCTCTGAAAAGTGAAAACTACACGCTTTTTCTTTTCCTTCCTTCAAAGCTTTCGCCGATTCGATTCACGCCGATTCGATTCGGCATCGTGGTTTCATGGTGGCGGTTGGGAAGGTTGCGAGCTGAAACGGTGCGTTTTGGAAGCAAAAAAAATAAAAATGAATGGGATTGGGAGTGGAGGATTGAGCATGATGGAGAAAGAGTACATAAGAAGGCACCACCGGCACCAGCCTGGGGAGAATCAGTGTGNCTCTGCGCTCGTTAAGCATATAAGAGCACCGGTTCCCCAGGTATGGTCCTTGGTGAGGAGGTTTGATCAACCACAGAAGTACAAACCNTTTGTAAGCAGATGTGTTGTAAAGGGAAACCTTGAGATTGGGAGTCTGAGAGAAGTTGATGTTAAGTCAGGGCTTCCTGCTACTACAAGTACAGAGAGATTGGAGCTCCTTGATGACAATGAGCATATTCTCAGCATCAGGATTATTGGTGGTGATCATAGACTTAGGAACTACTCGTCTATTTTGTCCCTCCACCCAGAAATTATCGATGGAAGGCCAGGTACACTAGTAATTGAATCTTTTGTGGTGGATATACCTGAGGGGAACACCAAAGATGAGACGTGCTACTTCGTCGAAGCCTTAATTAAGTGCAATCTCAAATCGCTTGCTGACGTCTCTGAAGGGCTTGCCGTGCAAGACCGCACTGAACCAATTGATCGGATATAGGAGCTGATAACAAGGAGTTGCTGAGAATCATAGCTGCCATGGATGAAGCTTCAGAGGGCTTTCCTATCTCGGAGGCTTAGGAGACGGACTGGCGATTGTGCTGCTTCCATTAATTAATAGAGTATCACAGGATGTTTCTTTCCATTTGCTCTATTGCTTGTCCTTGTTATATATGCTGGTTTCTCTCTTTAGTAGTAAAAGAAAGAACAGTATTTGAGACGTGATTGAAATCCAGATCCAGTGCAGTAACAGGTGAAAGATCAGGTACTTTTTGGAGATGTCTACGGACTACGGTTTCTGTCTTAGTTATGTGTTCCTTTATTGTATATAGATGGTGATGGTGATGATTGGTGAAACATGGTCTGTAGAATTGTTTTGATTGGTCAGCTGTAGTTTCTAATTGCAGTAGCCGAGGTTACTTAATTCTTATAAATTCTTATAACAGAGTTCTATTGTTACGGTTTTTTTTGTTTCATTGGCACATACTACGGTTCCTATGTTTTAGTTTTCAAGGTATGAGAGGTGAGAGGGAGATAGGGGATTGGAAAAGGCATAGGGCTACATTGTGAAGGTTGAACTTTTGCCCACTAGTTTGCATATTTCACGATTAAGTTTTGTCAAGGGGAATAGGGACTTGGTTCCTTTTTTATCAATGCTGGCGTATTTTCGAGCAAGTATTATTTCATT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00376	122432	125784	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000376s00018690.1	PF10604.4	Polyketide_cyc2	36	173	1.60E-13

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	6.023
SRR1783600	control	6.095
SRR1783602	moderate drought stress	10.060
SRR1811619	moderate drought stress	10.077

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	22.465
DRR006520	Root Summer glycyrrhizin high producing strain	22.023
DRR006521	Root Winter glycyrrhizin high producing strain	44.916
DRR006522	Root Winter glycyrrhizin high producing strain	43.518
DRR006523	Root Summer glycyrrhizin low producing strain	32.041
DRR006524	Root Summer glycyrrhizin low producing strain	32.403
DRR006525	Leaf Summer glycyrrhizin high producing strain	16.260
DRR006526	Leaf Summer glycyrrhizin high producing strain	16.273

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	21.284
SRR2868004	Drought Stress (root)	24.466
SRR2967015	Control (root)	45.952

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	25.309
SRR9715740	Leaf	36.502
SRR9715741	Leaf	37.769
SRR9715739	Root	17.318
SRR9715742	Root	16.788
SRR9715743	Root	16.052

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	37.891
SRR8749028	MeJA induced 9h	48.344
SRR8749029	MeJA induced 9h	46.674
SRR8749030	Uninduced	35.835
SRR8749031	Uninduced	58.032
SRR8749032	Uninduced	54.758

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	13.201
SRR8400027	Control - Root	16.606