Gene detail information of Glyur000376s00018687 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G53190.1 | 1.00E-75 | Nodulin MtN3 family protein |
| NR | XP_004498397.1 | 2.05E-157 | PREDICTED: bidirectional sugar transporter SWEET3-like [Cicer arietinum] |
| Swissprot | tr|Q6NQN5|SWET3_ARATH | 4.00E-93 | Bidirectional sugar transporter SWEET3 |
| trEMBL | tr|I1LX74|I1LX74_SOYBN | 2.00E-148 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G08190.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00376 | 97627 | 101061 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000376s00018687.1 | PF03083.11 | MtN3_slv | 9 | 96 | 6.80E-18 |
| Glyur000376s00018687.1 | PF03083.11 | MtN3_slv | 136 | 218 | 1.60E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.184 |
| SRR1783600 | control | 5.260 |
| SRR1783602 | moderate drought stress | 4.835 |
| SRR1811619 | moderate drought stress | 4.635 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 40.560 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 39.882 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.366 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.619 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 29.399 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.900 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.154 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.975 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 45.251 |
| SRR2868004 | Drought Stress (root) | 196.723 |
| SRR2967015 | Control (root) | 77.848 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 27.519 |
| SRR9715740 | Leaf | 57.656 |
| SRR9715741 | Leaf | 58.264 |
| SRR9715739 | Root | 2.787 |
| SRR9715742 | Root | 15.415 |
| SRR9715743 | Root | 14.563 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.650 |
| SRR8400027 | Control - Root | 19.546 |