Gene detail information of Glyur000376s00018675 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G53280.1 | 7.00E-53 | plastid division1 |
| NR | KEH40420.1 | 1.10E-156 | plastid division PDV1-like protein, putative [Medicago truncatula] |
| Swissprot | tr|Q9FK13|PDV1_ARATH | 3.00E-86 | Plastid division protein PDV1 |
| trEMBL | tr|A0A072VQM9|A0A072VQM9_MEDTR | 4.00E-157 | Plastid division PDV1-like protein, putative {ECO:0000313|EMBL:KEH40420.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00376 | 18032 | 20838 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 21.709 |
| SRR1783600 | control | 21.722 |
| SRR1783602 | moderate drought stress | 24.170 |
| SRR1811619 | moderate drought stress | 23.773 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.007 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.254 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.710 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.381 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 24.405 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 24.130 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.529 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.724 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.528 |
| SRR2868004 | Drought Stress (root) | 9.004 |
| SRR2967015 | Control (root) | 7.988 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.701 |
| SRR9715740 | Leaf | 6.401 |
| SRR9715741 | Leaf | 4.610 |
| SRR9715739 | Root | 12.070 |
| SRR9715742 | Root | 8.395 |
| SRR9715743 | Root | 9.206 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.275 |
| SRR8749028 | MeJA induced 9h | 2.162 |
| SRR8749029 | MeJA induced 9h | 2.393 |
| SRR8749030 | Uninduced | 1.604 |
| SRR8749031 | Uninduced | 1.010 |
| SRR8749032 | Uninduced | 1.067 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.306 |
| SRR8400027 | Control - Root | 14.952 |