Gene detail information of Glyur000376s00018671 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G53220.3 | 2.00E-41 | |
| NR | XP_006593760.1 | 0 | PREDICTED: uncharacterized protein LOC102662767 [Glycine max] |
| trEMBL | tr|K7LXZ8|K7LXZ8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G08775.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00376 | 5043 | 9568 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.164 |
| SRR1783600 | control | 6.139 |
| SRR1783602 | moderate drought stress | 7.084 |
| SRR1811619 | moderate drought stress | 6.938 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.474 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.162 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 7.803 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.554 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.573 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.641 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.434 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.457 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.147 |
| SRR2868004 | Drought Stress (root) | 13.950 |
| SRR2967015 | Control (root) | 16.545 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.150 |
| SRR9715740 | Leaf | 8.078 |
| SRR9715741 | Leaf | 7.088 |
| SRR9715739 | Root | 0.909 |
| SRR9715742 | Root | 4.309 |
| SRR9715743 | Root | 3.020 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.964 |
| SRR8749028 | MeJA induced 9h | 4.716 |
| SRR8749029 | MeJA induced 9h | 3.013 |
| SRR8749030 | Uninduced | 2.987 |
| SRR8749031 | Uninduced | 2.330 |
| SRR8749032 | Uninduced | 1.508 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.019 |
| SRR8400027 | Control - Root | 18.610 |