Gene detail information of Glyur000375s00022185 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G62420.1 | 9.00E-104 | NAD(P)-linked oxidoreductase superfamily protein |
| NR | XP_003539711.1 | 0 | PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like [Glycine max] |
| COG | YP_004193516.1 | 4.00E-62 | aldehyde reductase [Desulfobulbus propionicus DSM 2032] |
| Swissprot | tr|Q9SQ64|COR2_PAPSO | 5.00E-85 | Non-functional NADPH-dependent codeinone reductase 2 |
| trEMBL | tr|I1LNU9|I1LNU9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G00940.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00375 | 30017 | 32487 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000375s00022185.1 | PF00248.16 | Aldo_ket_red | 18 | 268 | 4.40E-47 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.122 |
| SRR1783600 | control | 0.160 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.473 |
| SRR2868004 | Drought Stress (root) | 5.773 |
| SRR2967015 | Control (root) | 8.931 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.647 |
| SRR9715740 | Leaf | 0.199 |
| SRR9715741 | Leaf | 0.346 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.112 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.024 |
| SRR8749028 | MeJA induced 9h | 0.132 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.034 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.016 |
| SRR8400027 | Control - Root | 5.435 |