Gene detail information of Glyur000374s00017945 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G18910.1 | 8.00E-92 | NOD26-like intrinsic protein 1;2 |
| NR | NP_001242005.1 | 2.04E-139 | uncharacterized protein LOC100812577 [Glycine max] |
| COG | NP_866369.1 | 2.00E-53 | nodulin-26 [Rhodopirellula baltica SH 1] |
| Swissprot | tr|Q8LFP7|NIP12_ARATH | 7.00E-114 | Aquaporin NIP1-2, N-terminally processed |
| trEMBL | tr|C6TL07|C6TL07_SOYBN | 8.00E-140 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU23597.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00374 | 35033 | 37661 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000374s00017945.1 | PF00230.15 | MIP | 33 | 234 | 4.70E-54 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.034 |
| SRR1783600 | control | 0.046 |
| SRR1783602 | moderate drought stress | 0.048 |
| SRR1811619 | moderate drought stress | 0.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.103 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.141 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.158 |
| SRR2868004 | Drought Stress (root) | 30.635 |
| SRR2967015 | Control (root) | 8.739 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.073 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.030 |
| SRR8749028 | MeJA induced 9h | 0.066 |
| SRR8749029 | MeJA induced 9h | 0.106 |
| SRR8749030 | Uninduced | 0.173 |
| SRR8749031 | Uninduced | 0.686 |
| SRR8749032 | Uninduced | 0.526 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.543 |
| SRR8400027 | Control - Root | 1.474 |