Gene detail information of Glyur000374s00017944.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G15240.1 | 9.00E-139 | Protein of unknown function (DUF604) |
| NR | XP_004514056.1 | 0 | PREDICTED: uncharacterized protein LOC101515637 [Cicer arietinum] |
| trEMBL | tr|A0A072UKL4|A0A072UKL4_MEDTR | 0 | Transferring glycosyl group transferase {ECO:0000313|EMBL:KEH29638.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00374 | 30246 | 33405 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT31 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000374s00017944.1 | PF04646.7 | DUF604 | 219 | 469 | 1.40E-96 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.262 |
| SRR1783600 | control | 8.177 |
| SRR1783602 | moderate drought stress | 6.376 |
| SRR1811619 | moderate drought stress | 6.381 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.001 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.311 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.654 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.502 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.128 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.151 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.165 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.158 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.127 |
| SRR2868004 | Drought Stress (root) | 9.061 |
| SRR2967015 | Control (root) | 9.024 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.774 |
| SRR9715740 | Leaf | 2.962 |
| SRR9715741 | Leaf | 1.866 |
| SRR9715739 | Root | 8.020 |
| SRR9715742 | Root | 9.962 |
| SRR9715743 | Root | 8.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.648 |
| SRR8749028 | MeJA induced 9h | 2.132 |
| SRR8749029 | MeJA induced 9h | 2.764 |
| SRR8749030 | Uninduced | 2.940 |
| SRR8749031 | Uninduced | 3.952 |
| SRR8749032 | Uninduced | 4.579 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.251 |
| SRR8400027 | Control - Root | 10.294 |