Gene detail information of Glyur000373s00018548 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G35010.2 | 3.00E-20 | thioredoxin O1 |
| NR | XP_006580058.1 | 4.75E-40 | PREDICTED: thioredoxin O1, mitochondrial-like isoform X2 [Glycine max] |
| COG | NP_870348.1 | 5.00E-06 | thioredoxin 1 [Rhodopirellula baltica SH 1] |
| Swissprot | tr|O64764|TRXO1_ARATH | 4.00E-24 | Thioredoxin O1, mitochondrial (Precursor) |
| trEMBL | tr|I1K367|I1K367_SOYBN | 2.00E-40 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G26300.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00373 | 165751 | 168445 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000373s00018548.1 | PF00085.15 | Thioredoxin | 32 | 90 | 3.50E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.772 |
| SRR1783600 | control | 10.224 |
| SRR1783602 | moderate drought stress | 7.439 |
| SRR1811619 | moderate drought stress | 8.147 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.418 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 22.422 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 24.869 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 23.098 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 32.280 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 28.170 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 17.224 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.849 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 44.808 |
| SRR2868004 | Drought Stress (root) | 43.140 |
| SRR2967015 | Control (root) | 38.551 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 22.770 |
| SRR9715740 | Leaf | 27.979 |
| SRR9715741 | Leaf | 33.951 |
| SRR9715739 | Root | 20.149 |
| SRR9715742 | Root | 20.356 |
| SRR9715743 | Root | 23.972 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 73.380 |
| SRR8749028 | MeJA induced 9h | 28.082 |
| SRR8749029 | MeJA induced 9h | 62.589 |
| SRR8749030 | Uninduced | 23.072 |
| SRR8749031 | Uninduced | 26.248 |
| SRR8749032 | Uninduced | 32.259 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 39.378 |
| SRR8400027 | Control - Root | 33.462 |