Gene detail information of Glyur000373s00018544 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G20000.1 | 2.00E-05 | VQ motif-containing protein |
| NR | AES65140.2 | 1.81E-36 | VQ motif protein [Medicago truncatula] |
| trEMBL | tr|G7INF7|G7INF7_MEDTR | 7.00E-37 | VQ motif protein {ECO:0000313|EMBL:AES65140.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00373 | 145026 | 145697 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000373s00018544.1 | PF05678.9 | VQ | 81 | 104 | 1.40E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 9.893 |
| SRR1783600 | control | 9.115 |
| SRR1783602 | moderate drought stress | 13.381 |
| SRR1811619 | moderate drought stress | 11.918 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.538 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.870 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 32.600 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 33.076 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.918 |
| SRR2868004 | Drought Stress (root) | 36.127 |
| SRR2967015 | Control (root) | 33.493 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 64.109 |
| SRR9715740 | Leaf | 26.231 |
| SRR9715741 | Leaf | 59.829 |
| SRR9715739 | Root | 11.491 |
| SRR9715742 | Root | 5.828 |
| SRR9715743 | Root | 6.085 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.970 |
| SRR8749028 | MeJA induced 9h | 2.780 |
| SRR8749029 | MeJA induced 9h | 1.341 |
| SRR8749030 | Uninduced | 1.663 |
| SRR8749031 | Uninduced | 2.182 |
| SRR8749032 | Uninduced | 0.466 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.082 |
| SRR8400027 | Control - Root | 17.350 |