Gene detail information of Glyur000373s00018534 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G39080.1 | 3.00E-106 | NAD(P)-binding Rossmann-fold superfamily protein |
| NR | XP_003524822.1 | 0 | PREDICTED: uncharacterized protein LOC100804718 [Glycine max] |
| COG | YP_005034995.1 | 3.00E-30 | hypothetical protein BMS_1149 [Bacteriovorax marinus SJ] |
| trEMBL | tr|I1K383|I1K383_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA05G26450.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00373 | 66541 | 70339 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.638 |
| SRR1783600 | control | 15.773 |
| SRR1783602 | moderate drought stress | 12.960 |
| SRR1811619 | moderate drought stress | 12.977 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.032 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.498 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.462 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.397 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.609 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.772 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.736 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 22.637 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.602 |
| SRR2868004 | Drought Stress (root) | 10.757 |
| SRR2967015 | Control (root) | 11.135 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 28.294 |
| SRR9715740 | Leaf | 41.903 |
| SRR9715741 | Leaf | 25.708 |
| SRR9715739 | Root | 6.149 |
| SRR9715742 | Root | 4.819 |
| SRR9715743 | Root | 5.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.656 |
| SRR8749028 | MeJA induced 9h | 2.658 |
| SRR8749029 | MeJA induced 9h | 2.901 |
| SRR8749030 | Uninduced | 2.469 |
| SRR8749031 | Uninduced | 1.861 |
| SRR8749032 | Uninduced | 1.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.024 |
| SRR8400027 | Control - Root | 24.189 |