Gene detail information of Glyur000372s00017106 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G36290.1 | 7.00E-44 | alpha/beta-Hydrolases superfamily protein |
| NR | KEH41402.1 | 1.61E-87 | alpha/beta fold hydrolase [Medicago truncatula] |
| trEMBL | tr|A0A072VHZ9|A0A072VHZ9_MEDTR | 6.00E-88 | Alpha/beta fold hydrolase {ECO:0000313|EMBL:KEH41402.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00372 | 62011 | 63680 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000372s00017106.1 | PF12697.2 | Abhydrolase_6 | 12 | 156 | 3.60E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.035 |
| SRR1783600 | control | 3.782 |
| SRR1783602 | moderate drought stress | 2.344 |
| SRR1811619 | moderate drought stress | 2.423 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.462 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.313 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.326 |
| SRR2868004 | Drought Stress (root) | 1.576 |
| SRR2967015 | Control (root) | 0.815 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.225 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.290 |
| SRR9715739 | Root | 0.040 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.252 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.229 |
| SRR8400027 | Control - Root | 6.732 |