Gene detail information of Glyur000372s00017101 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G34700.1 | 1.00E-15 | Pollen Ole e 1 allergen and extensin family protein |
| NR | XP_004505067.1 | 8.67E-51 | PREDICTED: pistil-specific extensin-like protein-like [Cicer arietinum] |
| trEMBL | tr|Q9XES6|Q9XES6_TRISU | 4.00E-50 | Putative hybrid proline-rich protein PRP1 {ECO:0000313|EMBL:AAD30268.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00372 | 31206 | 33402 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000372s00017101.1 | PF01190.12 | Pollen_Ole_e_I | 183 | 235 | 2.60E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 622.273 |
| SRR1783600 | control | 575.297 |
| SRR1783602 | moderate drought stress | 77.231 |
| SRR1811619 | moderate drought stress | 75.350 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 203.400 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 191.609 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.569 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.039 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 74.485 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 72.262 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.272 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.322 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 49.201 |
| SRR2868004 | Drought Stress (root) | 25.786 |
| SRR2967015 | Control (root) | 36.665 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.301 |
| SRR9715740 | Leaf | 0.075 |
| SRR9715741 | Leaf | 1.123 |
| SRR9715739 | Root | 46.004 |
| SRR9715742 | Root | 37.856 |
| SRR9715743 | Root | 39.642 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 31.268 |
| SRR8749028 | MeJA induced 9h | 3.149 |
| SRR8749029 | MeJA induced 9h | 15.977 |
| SRR8749030 | Uninduced | 0.076 |
| SRR8749031 | Uninduced | 0.078 |
| SRR8749032 | Uninduced | 1.569 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 64.713 |
| SRR8400027 | Control - Root | 69.191 |