Gene detail information of Glyur000372s00017093 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | AFK40766.1 | 1.01E-27 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SKH4|I3SKH4_LOTJA | 4.00E-28 | Uncharacterized protein {ECO:0000313|EMBL:AFK40766.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00372 | 3314 | 3722 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000372s00017093.1 | PF13962.1 | PGG | 3 | 66 | 3.50E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.303 |
| SRR1783600 | control | 0.123 |
| SRR1783602 | moderate drought stress | 0.091 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.376 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.144 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.289 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.004 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.648 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.541 |
| SRR2868004 | Drought Stress (root) | 2.899 |
| SRR2967015 | Control (root) | 0.963 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.642 |
| SRR9715740 | Leaf | 0.400 |
| SRR9715741 | Leaf | 2.508 |
| SRR9715739 | Root | 0.134 |
| SRR9715742 | Root | 0.909 |
| SRR9715743 | Root | 0.676 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.082 |
| SRR8749030 | Uninduced | 0.564 |
| SRR8749031 | Uninduced | 0.821 |
| SRR8749032 | Uninduced | 1.479 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.753 |
| SRR8400027 | Control - Root | 0.850 |