Gene detail information of Glyur000370s00022675 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G55470.2 | 9.00E-26 | Calcium-dependent lipid-binding (CaLB domain) family protein |
| NR | XP_006595905.1 | 2.54E-49 | PREDICTED: elicitor-responsive protein 1-like [Glycine max] |
| Swissprot | tr|Q0JHU5|ERG1_ORYSJ | 1.00E-23 | Elicitor-responsive protein 1 |
| trEMBL | tr|I1M855|I1M855_SOYBN | 9.00E-50 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G07410.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00370 | 157895 | 163629 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000370s00022675.1 | PF00168.25 | C2 | 7 | 41 | 0.00011 |
| Glyur000370s00022675.1 | PF00168.25 | C2 | 51 | 71 | 0.39 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.025 |
| SRR1783600 | control | 0.081 |
| SRR1783602 | moderate drought stress | 0.170 |
| SRR1811619 | moderate drought stress | 0.098 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.996 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.700 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.735 |
| SRR2868004 | Drought Stress (root) | 2.243 |
| SRR2967015 | Control (root) | 0.433 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.148 |
| SRR9715740 | Leaf | 15.986 |
| SRR9715741 | Leaf | 15.063 |
| SRR9715739 | Root | 0.278 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.462 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.119 |
| SRR8749028 | MeJA induced 9h | 0.152 |
| SRR8749029 | MeJA induced 9h | 0.135 |
| SRR8749030 | Uninduced | 40.655 |
| SRR8749031 | Uninduced | 2.178 |
| SRR8749032 | Uninduced | 0.465 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.806 |
| SRR8400027 | Control - Root | 0.946 |