Gene detail information of Glyur000370s00022668 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G12560.1 | 2.00E-79 | TRF-like 9 |
| NR | XP_004490887.1 | 0 | PREDICTED: telomere repeat-binding protein 4-like isoform X4 [Cicer arietinum] |
| Swissprot | tr|Q9C7B1|TRP3_ARATH | 2.00E-126 | Telomere repeat-binding protein 3 |
| trEMBL | tr|I1LMF8|I1LMF8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G34050.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00370 | 99795 | 103550 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.424 |
| SRR1783600 | control | 6.426 |
| SRR1783602 | moderate drought stress | 6.915 |
| SRR1811619 | moderate drought stress | 6.716 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.113 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.109 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 44.887 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 42.871 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.355 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.279 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.757 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.743 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 19.426 |
| SRR2868004 | Drought Stress (root) | 26.999 |
| SRR2967015 | Control (root) | 23.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.022 |
| SRR9715740 | Leaf | 18.678 |
| SRR9715741 | Leaf | 25.040 |
| SRR9715739 | Root | 4.720 |
| SRR9715742 | Root | 11.946 |
| SRR9715743 | Root | 8.411 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.211 |
| SRR8749028 | MeJA induced 9h | 52.723 |
| SRR8749029 | MeJA induced 9h | 31.036 |
| SRR8749030 | Uninduced | 19.973 |
| SRR8749031 | Uninduced | 42.040 |
| SRR8749032 | Uninduced | 43.716 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.738 |
| SRR8400027 | Control - Root | 22.142 |