Gene detail information of Glyur000370s00022663 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G39705.1 | 4.00E-15 | ROTUNDIFOLIA like 8 |
| NR | XP_003544212.1 | 1.23E-29 | PREDICTED: uncharacterized protein LOC100803152 [Glycine max] |
| trEMBL | tr|C6TJR2|C6TJR2_SOYBN | 5.00E-30 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G07320.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00370 | 46847 | 47148 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000370s00022663.1 | PF08137.7 | DVL | 61 | 79 | 1.60E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.276 |
| SRR1783600 | control | 5.846 |
| SRR1783602 | moderate drought stress | 12.189 |
| SRR1811619 | moderate drought stress | 12.363 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.874 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.437 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 61.804 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 59.526 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.515 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.030 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.292 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.911 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.208 |
| SRR2868004 | Drought Stress (root) | 4.552 |
| SRR2967015 | Control (root) | 2.649 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.379 |
| SRR9715740 | Leaf | 4.422 |
| SRR9715741 | Leaf | 3.684 |
| SRR9715739 | Root | 2.733 |
| SRR9715742 | Root | 1.994 |
| SRR9715743 | Root | 3.035 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.583 |
| SRR8749028 | MeJA induced 9h | 3.784 |
| SRR8749029 | MeJA induced 9h | 1.718 |
| SRR8749030 | Uninduced | 0.382 |
| SRR8749031 | Uninduced | 0.811 |
| SRR8749032 | Uninduced | 2.505 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.981 |
| SRR8400027 | Control - Root | 4.998 |