Gene detail information of Glyur000370s00022660 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G39710.1 | 4.00E-134 | Eukaryotic aspartyl protease family protein |
| NR | XP_004503158.1 | 0 | PREDICTED: aspartic proteinase PCS1-like [Cicer arietinum] |
| Swissprot | tr|Q9LZL3|PCS1L_ARATH | 7.00E-165 | Aspartic proteinase PCS1 (Precursor) |
| trEMBL | tr|I1JI04|I1JI04_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G41640.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00370 | 23876 | 25219 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000370s00022660.1 | PF14543.1 | TAXi_N | 62 | 227 | 8.60E-36 |
| Glyur000370s00022660.1 | PF14541.1 | TAXi_C | 260 | 432 | 1.20E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.407 |
| SRR1783600 | control | 0.399 |
| SRR1783602 | moderate drought stress | 0.368 |
| SRR1811619 | moderate drought stress | 0.454 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.395 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.400 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.166 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.243 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.247 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.247 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 28.661 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 31.874 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.609 |
| SRR2868004 | Drought Stress (root) | 5.088 |
| SRR2967015 | Control (root) | 6.728 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.526 |
| SRR9715740 | Leaf | 9.615 |
| SRR9715741 | Leaf | 9.028 |
| SRR9715739 | Root | 0.813 |
| SRR9715742 | Root | 1.395 |
| SRR9715743 | Root | 1.236 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.786 |
| SRR8749028 | MeJA induced 9h | 1.579 |
| SRR8749029 | MeJA induced 9h | 1.124 |
| SRR8749030 | Uninduced | 4.388 |
| SRR8749031 | Uninduced | 1.910 |
| SRR8749032 | Uninduced | 1.625 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.721 |
| SRR8400027 | Control - Root | 2.312 |