Gene detail

Gene detail information of Glyur000369s00020560.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G21250.1	1.00E-155	cell wall-associated kinase
NR	XP_006595272.1	0	PREDICTED: uncharacterized protein LOC100784078 [Glycine max]
COG	YP_001958461.1	9.00E-25	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q9LMN8\|WAK3_ARATH	0	Wall-associated receptor kinase 3 (Precursor)
trEMBL	tr\|K7LY32\|K7LY32_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA13G09430.2}

Sequence

Transcript Sequence

>Glyur000369s00020560.1
ATGAAAGTGAAGGAGAAGCTGCACAGTACGCAACTGTTGATAATGGTTGCATATTTAGCCCTGCAGTTGGTAGGAGCAGTAATTATTGCAGCTGATGATCAAGCAGCCCCTTCTCCAGCACCAGCACTGACACCAAAACAATTAGCCCTGCCTGGCTGCCCTTCCACTTGTGGAGGTGTAGAAATCCCTTACCCATTTGGCATAGGCAANTCATCTGCACCTGGTGATAATAAAAAACCCTGTTACTTGCGGCCCAGATTTAAACTCACTTGCAATCACTCCAAATTATATCTGGGAAAAATATATCAAATTTCACACATAGACATCCTCCGAGGTCAAATGGACATCATGTTTGGCGTCTCATCATCTTGCAATAATAGTGAACCTTTACCTTCTCCCTCCCTCAAGTTCTCTTGGTTAAGCATTTCAAACAAGAAAAACAAGTTCATCACTGTTGGCTGCAACAGCTACGGTTATCTCTATAGCGACTATAACGGGAACTTATATGCAACGGGGTGCCTAACAAGGTGTTATGGCCATGATCCATTGGTCAATGATGGAACGTGTTCCGGTATAGGGTGTTGCCAGGTGGATATTCCTCCTCGGATGAGGAATATCACTATACAAGCTTATAACTTTTATGATTCATCGTATAATAGAATTACACCTCTTCTTGGAGAGTCATGCACCTATGCCTTTGTTGTCAAGCAAGACAACTATGTTTTTTCTCTCAATCATTTACAACAAGGTGGTTTACCTCGCCAGGAATACCCCATGGTTGTTGACTGGGCTGTAGGAAACAAAAGCTGTAGTGCTGCTACACAGAGTGAGATCACATGCGGGAAACACAGCCAATGCAATGACACGGACACAGATATTGGCTACCGATGCATATGCGATCCAGGTTATGAAGGGAACCCCTACCATCCCGACGGCTGCATAGATATAGACGAATGCGAGATGGGAATTCATACATGTATAAGTAGAGAAAATTGTATCAACGCCATTGGGAATTACTACTGTTTCTGTCCTAAGGGGCAATCTGGTGATGGAACAAAGGAAGTAGGGTGTCATCAACGTGATGTACTCTCCAAGGTTGTCATTGCCATTGGAGTTGCAATAGGAGTTGTTGTTCTGTCTATGGGGGCTTCCTCGCAGTTCTTGATATACCAGAAAAGGAAACTCATCAAACTGAAAAAGAAATTCTTTGAGCAGAATGGCGGTTTAATTTTGCTACAAAGACTTTCTACAAGAGAAGACTCCTCTCAAACTGCTAAAATATTCACAGAGGATCAACTAAAGAAGGCCACCAACAACTATGATGAGAGCTTAATCATTGGTAGAGGAGGTTTTGGCATAGTTTTCAAAGGATTTCTACCGGGCAACAAAATCGTTGCTATCAAAAGGTCCAAAATAATAGATGCGAGCCAAATCGAGCAATTCATTAATGAGGTGGTTGTTCTCCTCCAAATAAACCATAGGAATGTGGTCAAACTCTTGGGGTGCTGTTTAGAGGCAGAGGTTCCTTTGTTGGTTTATGAATTTGTCAACAATGGTACCCTATTTGACTTTTTACACACAGAAGATAAGGAGAATAATGCAGCACCATGGAAAATCCGTCTAAAAATAGCAGCAGAGGTAGCTGAAGCTCTGTCATATCTGCATTCATCTGTCTCCATACCCATTATCCATAGAGATGTTAAGAGTGCCAACATTCTATTGGATGTCAATTACATTGCCAAAGTGTCTGATTTTGGAGCTTCTAGATTGGTTCCACTTGATCAAACTGAGATAGCCACAGTGGTGCAAGGGACTATTGGCTACTTAGACCCAGAGTATATGCTAACAAACCAATTGAACGAGAAAAGTGATGTATATAGCTTTGGGGTAGTGCTTGTGGAGCTGCTAACAGGGGAGAAACCTTTTCCCTTTGTTAGGCCAGAAGAGAAGAGAAACCTTCCTATGCACTTCCTATCTTGCTTGAAAAATGATCGCATGTTTGAGGTTCTTCAAGATGGCATCTTGAACGAAGAAAATAAGCAAGAGATCAAGGAGGTTGCTATTCTTGCAGCAAAGTGCTTGAGACTTAAAGGGGAGGAAAGGCCTAGCATGAAGGAAGTGGCTGTGGAATTGGAGGGAATGAGGTCAATGGAGAAGCATTCTTGGATTAATACAGATGTAGAGGAGACTCGGTACTTGCTTCATGAAACATCATCATCTAGCATTTATGAAACTGGTGATAGCAGCGGACATGGAAATACTGGGTATGGCAGCTTGAAAGATAATGTACAACTGATTGTCTTGGATGATGGAAGATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00369	154861	157527	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.17.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005509 calcium ion binding

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

GO:0030247 polysaccharide binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000369s00020560.1	PF13947.1	GUB_WAK_bind	51	155	1.10E-19
Glyur000369s00020560.1	PF07645.10	EGF_CA	315	350	5.80E-07
Glyur000369s00020560.1	PF00069.20	Pkinase	445	707	1.10E-48

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.015
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.014
SRR1811619	moderate drought stress	0.070

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.047
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.448
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.356

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.000
SRR2868004	Drought Stress (root)	0.000
SRR2967015	Control (root)	0.000

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	11.528
SRR9715740	Leaf	6.064
SRR9715741	Leaf	18.047
SRR9715739	Root	0.000
SRR9715742	Root	0.013
SRR9715743	Root	0.077

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.043
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.096
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.010

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.009
SRR8400027	Control - Root	0.009