Gene detail

Gene detail information of Glyur000369s00020559

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G21230.1	8.00E-63	wall associated kinase 5
NR	KEH39809.1	3.95E-176	wall associated kinase-like protein, putative [Medicago truncatula]
COG	YP_828710.1	5.00E-16	serine/threonine protein kinase [Candidatus Solibacter usitatus Ellin6076]
Swissprot	tr\|Q9LMN7\|WAK5_ARATH	8.00E-70	Wall-associated receptor kinase 5 (Precursor)
trEMBL	tr\|A0A072VCQ2\|A0A072VCQ2_MEDTR	1.00E-176	Wall associated kinase-like protein, putative {ECO:0000313\|EMBL:KEH39809.1}

Sequence

Transcript Sequence

>Glyur000369s00020559.1
ATGATCGACGATGGTCATGGAACGTGTTCGGGTATAGGGTGTTGCCAGCTGGATATTCCTCCTAGAGTGTGGAATATCAGCATAGAAGCTGATACCTTCACCAGTTCTTCAACGGGATCTCAGGAAGAGGAAATCTGCACCTATTCCTTCGTTGTCAAGAAAGACAATGTTGCTTCCCAGAATAGATCCGACTACGCGTGCAGGGACAATAGCTACTGCGATGACATGGACACGGAATATGGTTACCGATGTAGATGCAATCCAGGTTACGAAGGAAACCCGTACCATCCCGATGGCTGCACAGACATAGACGAATGTGAGATCGGAATTCATACATGTATCAGCAGGGAAAATTGTATCAACACCGATGGGAGTCACAGATGTTTCTGTCCTAAGGGGCAATCTGGAGATGGAACAAAGGAAGGAACTCGTGCTACCGACATAATGTCCTCAGGACCTGTAATAGGAGCTATTGTTCTGTTTGTGGGGACTGTCTTACTTTTTATANACCAGAAAAGGAAATTGATCAAACTGAATGAGAAATTCTTTGAGCAAATTAATGGTGGTCTCCTTTTACTACAACAACTCTCTAAAAAAGATGATTCCCCACAATCAGTGCAAGTATTCACAGAAGGACAACTAAAGAAGGCCACTAACAACTATGACCAGAGCTTAATCATTGGCAGGGGAGGTTTTGAAGGTAATGCCAATANTGCAACATGGGAAACTCGTCTGAGAATAGCAGCAGAGGTAGCTGGAGCTCTGTCATATCTGCATTCAGCTGCCTCAATACCTATTATCCATAGAGATGTGAAGAGTGCCAAAATTCTATTGGATGACACTCACACTGCCAAAGTGTCTGATTTTGGAGCTTCAAAATTGGTTCCACTTGATCAAACTGAGATAGCCACAATGGTGCAGGGAACTCTTGGCTACTTGGATCCAGAGTTAATGCAAACACANCAACTAACTGAGAAAAGTGATGTCTATAGTTTTGGTGTAGTGCTTGTAGAACTCCTAACTGGGGAGAAACCTATTTCTATTCATAGGGTAGAAGAGAGAAGAAGTCTTGCTGTGCACTTTCTATCTTGTTTAAAAGAGGATCGTGTTTTTGAAGTTATTCAAGATGGCATCTTGAATGAAGAAAATAAGCAGGAGATCAAGGAGGTTNTTGTTCTTGCATCAAAGTGCTTGAGACCTCAAGGGAAGGAAAGACCTAGCATGAAGGAAGTGGCTATGGAGTTGGAGGGAATGAGGTTAATGGAGAAGCACTCGTGGATCAATGCTGNCCAAAATTTAGAGGAGACTCGGTACTTGCTTCATGAAGCATCATCATCTAGCACTTATGAACTTGGTCATGACAGCAAGGATGAATTAGTGGGTGTGACAGTTTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00369	140369	142643	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.5.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005509 calcium ion binding

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000369s00020559.1	PF07645.10	EGF_CA	102	135	8.50E-09
Glyur000369s00020559.1	PF00069.20	Pkinase	237	411	1.50E-30

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.029
SRR1783600	control	0.031
SRR1783602	moderate drought stress	0.027
SRR1811619	moderate drought stress	0.005

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.275
DRR006520	Root Summer glycyrrhizin high producing strain	0.190
DRR006521	Root Winter glycyrrhizin high producing strain	0.098
DRR006522	Root Winter glycyrrhizin high producing strain	0.233
DRR006523	Root Summer glycyrrhizin low producing strain	0.099
DRR006524	Root Summer glycyrrhizin low producing strain	0.157
DRR006525	Leaf Summer glycyrrhizin high producing strain	30.400
DRR006526	Leaf Summer glycyrrhizin high producing strain	30.031

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.000
SRR2868004	Drought Stress (root)	0.000
SRR2967015	Control (root)	0.000

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	149.619
SRR9715740	Leaf	103.205
SRR9715741	Leaf	218.298
SRR9715739	Root	0.039
SRR9715742	Root	1.272
SRR9715743	Root	0.900

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.002
SRR8749029	MeJA induced 9h	0.146
SRR8749030	Uninduced	0.045
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.155
SRR8400027	Control - Root	0.173