Gene detail information of Glyur000369s00020556 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G61870.1 | 2.00E-84 | |
| NR | AFK35215.1 | 2.79E-151 | unknown [Lotus japonicus] |
| trEMBL | tr|I3S4M3|I3S4M3_LOTJA | 1.00E-151 | Uncharacterized protein {ECO:0000313|EMBL:AFK35215.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00369 | 124998 | 126668 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000369s00020556.1 | PF13301.1 | DUF4079 | 67 | 236 | 1.30E-56 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.612 |
| SRR1783600 | control | 0.457 |
| SRR1783602 | moderate drought stress | 0.283 |
| SRR1811619 | moderate drought stress | 0.356 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.802 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.872 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.113 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.590 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.711 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 154.520 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 152.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.772 |
| SRR2868004 | Drought Stress (root) | 3.309 |
| SRR2967015 | Control (root) | 0.787 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 114.647 |
| SRR9715740 | Leaf | 126.434 |
| SRR9715741 | Leaf | 73.789 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.246 |
| SRR9715743 | Root | 0.066 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.709 |
| SRR8749028 | MeJA induced 9h | 1.728 |
| SRR8749029 | MeJA induced 9h | 0.782 |
| SRR8749030 | Uninduced | 0.545 |
| SRR8749031 | Uninduced | 0.086 |
| SRR8749032 | Uninduced | 0.293 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.083 |
| SRR8400027 | Control - Root | 0.926 |