Gene detail information of Glyur000369s00020555 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G46630.1 | 1.00E-17 | |
| NR | XP_004494849.1 | 1.80E-115 | PREDICTED: serine/arginine repetitive matrix protein 1-like [Cicer arietinum] |
| trEMBL | tr|V7BQK4|V7BQK4_PHAVU | 5.00E-111 | Uncharacterized protein {ECO:0000313|EMBL:ESW19335.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00369 | 121470 | 123072 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 20.754 |
| SRR1783600 | control | 20.683 |
| SRR1783602 | moderate drought stress | 20.990 |
| SRR1811619 | moderate drought stress | 21.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 51.030 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 50.115 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.208 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.195 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 144.593 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 142.665 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 274.792 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 272.365 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 57.274 |
| SRR2868004 | Drought Stress (root) | 36.664 |
| SRR2967015 | Control (root) | 35.049 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 48.306 |
| SRR9715740 | Leaf | 57.404 |
| SRR9715741 | Leaf | 74.338 |
| SRR9715739 | Root | 25.677 |
| SRR9715742 | Root | 45.806 |
| SRR9715743 | Root | 36.626 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.938 |
| SRR8749028 | MeJA induced 9h | 5.224 |
| SRR8749029 | MeJA induced 9h | 5.374 |
| SRR8749030 | Uninduced | 2.511 |
| SRR8749031 | Uninduced | 0.512 |
| SRR8749032 | Uninduced | 1.589 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.601 |
| SRR8400027 | Control - Root | 11.035 |