Gene detail information of Glyur000369s00020552 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G46690.1 | 1.00E-35 | SAUR-like auxin-responsive protein family |
| NR | XP_007135297.1 | 1.16E-54 | hypothetical protein PHAVU_010G117500g [Phaseolus vulgaris] |
| Swissprot | tr|P33082|AXX15_SOYBN | 4.00E-14 | Auxin-induced protein X15 |
| trEMBL | tr|V7ASU7|V7ASU7_PHAVU | 4.00E-55 | Uncharacterized protein {ECO:0000313|EMBL:ESW07291.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00369 | 94642 | 101654 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000369s00020552.1 | PF02519.9 | Auxin_inducible | 25 | 92 | 6.80E-25 |
| Glyur000369s00020552.1 | PF02519.9 | Auxin_inducible | 171 | 251 | 1.40E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 33.992 |
| SRR1783600 | control | 33.932 |
| SRR1783602 | moderate drought stress | 30.299 |
| SRR1811619 | moderate drought stress | 29.652 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 82.581 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 85.811 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 173.121 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 170.831 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 70.270 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 71.466 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 115.854 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 117.218 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.504 |
| SRR2868004 | Drought Stress (root) | 22.817 |
| SRR2967015 | Control (root) | 34.076 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 97.080 |
| SRR9715740 | Leaf | 144.849 |
| SRR9715741 | Leaf | 137.512 |
| SRR9715739 | Root | 25.614 |
| SRR9715742 | Root | 56.764 |
| SRR9715743 | Root | 47.502 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 42.199 |
| SRR8749028 | MeJA induced 9h | 80.538 |
| SRR8749029 | MeJA induced 9h | 40.342 |
| SRR8749030 | Uninduced | 24.405 |
| SRR8749031 | Uninduced | 4.533 |
| SRR8749032 | Uninduced | 13.114 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.398 |
| SRR8400027 | Control - Root | 19.777 |